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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2578.1TPM
GTEx:927.4RPKM
FANTOM5:3263.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
 
 
 

Antibody staining

Antibody HPA001762

  

Antibody CAB000080

  

Antibody CAB058687

  

Adipocytes

 High   High  

Fibroblasts

 High   High  
        
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:High
 

Antibody staining

Antibody HPA001762

  

Antibody CAB000080

  

Antibody CAB058687

  

Adipocytes

 High   High   High  

Fibroblasts

 Not detected   High   High  

Peripheral nerve

 High  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

2578.1
N/A Female, age 80
Sample 1
TPM: 3130.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 1838.7
N/A Female, age 57
Sample 3
TPM: 1818.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 2279.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 3823.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

927.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 1039.6
Samples: 350

Max RPKM: 1680.4
Min RPKM: 430.9
Std RPKM: 226.4
Median RPKM: 1025.6
GTEX-11EMC-2826-SM-5PNY6 1680.4
GTEX-139T8-0226-SM-5L3EA 1617.0
GTEX-UJHI-1626-SM-3DB9A 1606.3
GTEX-12ZZX-0226-SM-5DUXU 1605.3
GTEX-Y8E4-0726-SM-4WWFN 1577.0
GTEX-XQ8I-0526-SM-4BOPS 1551.3
GTEX-YF7O-2426-SM-5IFJL 1548.7
GTEX-QDT8-0226-SM-32PL4 1545.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 754.4
Samples: 227

Max RPKM: 1598.8
Min RPKM: 400.8
Std RPKM: 187.4
Median RPKM: 737
GTEX-13OVJ-0926-SM-5K7U1 1598.8
GTEX-13PL7-1226-SM-5SIAR 1304.5
GTEX-13RTK-0726-SM-5Q5EN 1302.4
GTEX-13OVH-1126-SM-5K7YP 1295.1
GTEX-ZQUD-0526-SM-57WG4 1269.5
GTEX-ZXES-0926-SM-5E43O 1232.3
GTEX-13OW7-1126-SM-5K7V6 1151.0
GTEX-X585-2526-SM-4QAS1 1130.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

3263.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 3263.7
FF:10010-101C1 65,65,76 years, mixed 3263.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.