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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:456.5TPM
GTEx:62.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glial cells:Low
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA001762

 

Antibody CAB000080

 

Antibody CAB058687

 

Endothelial cells

High   High   High  

Glial cells

Low   Medium   Low  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

Not detected   Medium   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

456.5

N/A Male, age 5
Sample 1
TPM: 267.0
overview Female, age 40
Sample 2
TPM: 119.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 982.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

62.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 67.2
Samples: 114

Max RPKM: 511.1
Min RPKM: 6.2
Std RPKM: 62
Median RPKM: 52
GTEX-144FL-3026-SM-5O99C 511.1
GTEX-13JVG-3126-SM-5L3FH 326.8
GTEX-139T8-1026-SM-5J2MC 234.3
GTEX-132Q8-3026-SM-5PNVG 202.7
GTEX-NPJ7-2726-SM-2I3FT 183.0
GTEX-WZTO-2926-SM-3NM9I 172.0
GTEX-NPJ8-1526-SM-2D7VU 156.4
GTEX-ZZPT-3026-SM-5GZXH 142.5
GTEX-PWO3-0926-SM-2I5EY 114.8
GTEX-X585-3026-SM-46MWF 114.5
GTEX-13JUV-2926-SM-5LZX7 113.0
GTEX-13IVO-2926-SM-5L3CZ 106.3
GTEX-13NYS-3126-SM-5KLYV 105.1
GTEX-13OVJ-2826-SM-5L3GW 103.4
GTEX-13NYC-2826-SM-5K7WR 96.9
GTEX-13FHO-3026-SM-5J1O9 94.6
GTEX-11EI6-3026-SM-5GZZO 94.0
GTEX-11GSP-3226-SM-5986O 92.1
GTEX-1399T-3026-SM-5KLZC 91.7
GTEX-RU72-3026-SM-5SI7Y 88.5
GTEX-13QIC-2926-SM-5J2NF 88.1
GTEX-12ZZW-2926-SM-5LZUP 87.7
GTEX-12WSA-2926-SM-5EQ4D 86.7
GTEX-QVUS-2826-SM-3GADB 86.3
GTEX-13X6K-2926-SM-5Q5D5 85.8
GTEX-QMR6-1426-SM-32PLA 84.5
GTEX-1117F-3226-SM-5N9CT 82.1
GTEX-13S7M-3126-SM-5RQJQ 81.6
GTEX-14ASI-3026-SM-5S2PN 80.8
GTEX-12ZZZ-3026-SM-5BC67 79.5
GTEX-1445S-3026-SM-5O9BR 78.6
GTEX-11OC5-0726-SM-5P9JK 78.5
GTEX-145LS-3126-SM-5Q5BY 77.4
GTEX-11DXY-3226-SM-5GIDE 77.2
GTEX-1192X-3126-SM-5N9BY 72.9
GTEX-11GSO-2926-SM-5HL73 72.2
GTEX-11ONC-2926-SM-5P9JM 72.0
GTEX-XLM4-3026-SM-4AT6L 70.5
GTEX-OXRN-2426-SM-2I5EQ 70.3
GTEX-ZE7O-3126-SM-5HL5X 70.2
GTEX-QVJO-1426-SM-2S1QY 66.4
GTEX-12WSD-3126-SM-5HL7P 65.7
GTEX-13OW7-3026-SM-5L3GY 64.9
GTEX-R55F-1326-SM-5S2V4 64.9
GTEX-13PL6-3126-SM-5LUAR 64.1
GTEX-14A5I-2926-SM-5Q5CQ 63.2
GTEX-11TTK-2926-SM-5PNYP 63.0
GTEX-QDT8-2926-SM-32PKC 62.9
GTEX-131XW-3126-SM-5LZUC 61.9
GTEX-Y8DK-0826-SM-4TT3T 59.2
GTEX-13OW8-2826-SM-5L3GC 57.7
GTEX-11PRG-2926-SM-5987A 56.4
GTEX-ZVT3-3026-SM-5E43N 55.6
GTEX-11EMC-3226-SM-5EGKW 54.5
GTEX-Y111-2726-SM-4TT3N 54.3
GTEX-12ZZY-3026-SM-5GCOU 53.3
GTEX-13O3Q-2926-SM-5KM45 53.1
GTEX-13X6J-3026-SM-5Q5CU 50.8
GTEX-11WQK-3026-SM-5EQL6 50.5
GTEX-147GR-3026-SM-5S2ML 50.5
GTEX-12126-1026-SM-5P9JJ 49.6
GTEX-13PVQ-3026-SM-5SI93 49.6
GTEX-13OW6-3026-SM-5J2MI 48.8
GTEX-12WSC-3026-SM-5GCNF 47.8
GTEX-13FHP-3026-SM-5IJBS 47.3
GTEX-11NUK-2926-SM-5A5MD 45.4
GTEX-WWYW-3126-SM-3NB39 45.2
GTEX-X4XX-3026-SM-3NMB2 45.0
GTEX-144GL-3026-SM-5Q5CW 44.5
GTEX-145MG-3026-SM-5RQJA 43.7
GTEX-1128S-2726-SM-5H12C 42.7
GTEX-N7MT-1126-SM-5SI7V 42.1
GTEX-11O72-2926-SM-5BC4V 40.2
GTEX-13O3O-3126-SM-5KM3H 40.0
GTEX-YJ89-3026-SM-5IFJI 39.7
GTEX-131YS-3126-SM-5KLYT 39.3
GTEX-11DXW-1126-SM-5H12Q 38.5
GTEX-145MF-2726-SM-5O995 37.9
GTEX-ZAK1-3026-SM-5S2MJ 36.3
GTEX-XOTO-3026-SM-4B65M 36.0
GTEX-117XS-3026-SM-5N9CA 35.4
GTEX-Q2AG-2926-SM-2HMJ3 34.6
GTEX-ZUA1-3026-SM-59HJC 34.6
GTEX-WHSE-3026-SM-3P5ZH 33.8
GTEX-14BMV-3026-SM-5S2PQ 33.7
GTEX-12WSH-3026-SM-5CVNI 33.2
GTEX-145MH-3026-SM-5Q5DZ 32.8
GTEX-13FLW-1426-SM-5K7YE 31.6
GTEX-13VXU-2926-SM-5LU5C 31.6
GTEX-111FC-3126-SM-5GZZ2 31.4
GTEX-11GS4-3126-SM-5A5LH 31.0
GTEX-UTHO-3026-SM-3GAFB 29.8
GTEX-13G51-3026-SM-5IJB8 29.1
GTEX-13FXS-3126-SM-5J2NN 28.0
GTEX-11NV4-2126-SM-5N9DS 27.6
GTEX-13NYB-3026-SM-5IJD7 27.2
GTEX-T2IS-3026-SM-32QPM 27.0
GTEX-13SLX-3126-SM-5S2Q5 26.8
GTEX-12ZZX-2926-SM-5GCOQ 25.3
GTEX-T6MN-2626-SM-32PMQ 25.3
GTEX-YFC4-3126-SM-5PNV6 24.9
GTEX-ZYFD-3026-SM-5E44C 24.6
GTEX-WVLH-3026-SM-3MJG9 24.5
GTEX-RNOR-2326-SM-2TF4I 23.9
GTEX-13OVH-3026-SM-5MR4N 23.6
GTEX-TSE9-3026-SM-3DB76 22.9
GTEX-Z93S-2926-SM-57WB9 22.6
GTEX-ZAJG-3126-SM-5HL9J 22.4
GTEX-PVOW-2526-SM-2XCF7 20.1
GTEX-1313W-3126-SM-5LZUI 18.9
GTEX-WL46-2926-SM-3LK82 18.3
GTEX-T5JC-2426-SM-3NMDB 18.0
GTEX-11ZUS-2926-SM-5FQSL 17.6
GTEX-11OF3-2926-SM-5HL78 6.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 57.7
Samples: 108

Max RPKM: 283.7
Min RPKM: 6.9
Std RPKM: 43.8
Median RPKM: 44.8
GTEX-11ZUS-0011-R10b-SM-5BC79 283.7
GTEX-13N2G-0011-R10a-SM-5MR34 246.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 159.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 159.7
GTEX-X4EP-0011-R10B-SM-4QASJ 157.9
GTEX-XMD1-0011-R10A-SM-4AT4A 153.7
GTEX-NL4W-0011-R10A-SM-2I3DY 128.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 124.8
GTEX-QVUS-0011-R10A-SM-3GIK3 109.1
GTEX-1445S-0011-R10a-SM-5PNWB 105.3
GTEX-13NYS-0011-R10a-SM-5MR4S 105.0
GTEX-X261-0011-R10B-SM-4E3JT 104.6
GTEX-1477Z-0011-R10b-SM-5S2RF 100.6
GTEX-13QJC-0011-R10a-SM-5SI63 99.2
GTEX-12WSA-0011-R10b-SM-5P9ET 98.6
GTEX-XLM4-0011-R10A-SM-4AT5P 93.0
GTEX-ZV68-0011-R10a-SM-51MT7 89.6
GTEX-139TS-0011-R10a-SM-5K7TU 88.9
GTEX-11WQC-0011-R10a-SM-57WCT 87.5
GTEX-13FHO-0011-R10b-SM-5J2MM 84.7
GTEX-QMR6-0011-R10A-SM-32PKO 82.4
GTEX-13OW8-0011-R10a-SM-5L3H6 80.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 78.7
GTEX-P44H-0011-R10A-SM-2XCEK 78.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 75.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 74.8
GTEX-13SLW-0011-R10a-SM-5S2UI 73.1
GTEX-13JUV-0011-R10b-SM-5LZXR 71.7
GTEX-11H98-0011-R10b-SM-5NQ98 71.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 69.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 67.2
GTEX-13JVG-0011-R10b-SM-5KM2P 62.8
GTEX-OXRO-0011-R10A-SM-2I5EH 62.1
GTEX-13X6K-0011-R10a-SM-5P9JR 59.8
GTEX-12WSD-0011-R10b-SM-5GU79 59.6
GTEX-14753-0011-R10b-SM-5S2WE 59.6
GTEX-RVPU-0011-R10A-SM-2XCAH 58.9
GTEX-OXRN-0011-R10A-SM-2I5GC 58.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 57.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 56.9
GTEX-13IVO-0011-R10a-SM-5LZY3 56.7
GTEX-13OW6-0011-R10a-SM-5L3HE 55.4
GTEX-131XW-0011-R10a-SM-5DUVA 55.0
GTEX-14BIL-0011-R10a-SM-5SI75 54.8
GTEX-13NZA-0011-R10b-SM-5KM54 53.0
GTEX-11WQK-0011-R10a-SM-5BC6R 51.1
GTEX-147F4-0011-R10b-SM-5S2WC 49.1
GTEX-147GR-0011-R10b-SM-5S2UM 48.5
GTEX-QDT8-0011-R10A-SM-32PKG 48.2
GTEX-145LU-0011-R10a-SM-5PNWJ 48.0
GTEX-13X6I-0011-R10a-SM-5PNWI 46.3
GTEX-ZF28-0011-R10a-SM-4WWEH 45.4
GTEX-ZXG5-0011-R10a-SM-57WDD 45.3
GTEX-13OVL-0011-R10a-SM-5L3GS 45.2
GTEX-ZUA1-0011-R10a-SM-51MT6 44.5
GTEX-13O3O-0011-R10a-SM-5LUA9 43.6
GTEX-N7MT-0011-R10A-SM-2I3E1 43.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 43.4
GTEX-13QIC-0011-R10a-SM-5O9C7 41.7
GTEX-ZVT3-0011-R10b-SM-57WB6 40.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 40.0
GTEX-N7MS-0011-R10A-SM-2HMJK 39.8
GTEX-12WSM-0011-R10a-SM-5DUWV 39.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 39.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 38.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 38.2
GTEX-TSE9-0011-R10A-SM-3DB7O 36.9
GTEX-13G51-0011-R10b-SM-5LZYF 36.5
GTEX-X4XX-0011-R10B-SM-46MWO 36.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 35.8
GTEX-WWYW-0011-R10A-SM-3NB35 35.2
GTEX-13FXS-0011-R10a-SM-5J2MA 35.1
GTEX-13S7M-0011-R10b-SM-5PNZB 34.9
GTEX-145LS-0011-R10a-SM-5PNUQ 34.8
GTEX-T5JC-0011-R10A-SM-32PM2 34.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 34.4
GTEX-131YS-0011-R10b-SM-5EQ5N 34.4
GTEX-13O3Q-0011-R10b-SM-5KM39 31.4
GTEX-13OW7-0011-R10a-SM-5L3H3 31.2
GTEX-YJ89-0011-R10a-SM-4SOK9 31.1
GTEX-S7SE-0011-R10A-SM-2XCDF 31.0
GTEX-12WSH-0011-R10a-SM-5LZUS 29.1
GTEX-X585-0011-R10A-SM-46MUY 27.3
GTEX-13N1W-0011-R10b-SM-5MR4H 26.2
GTEX-12WSF-0011-R10a-SM-5LZVH 25.9
GTEX-13X6J-0011-R10b-SM-5PNWA 25.9
GTEX-13FLW-0011-R10b-SM-5LZZF 25.7
GTEX-12WSC-0011-R10a-SM-5GU57 25.0
GTEX-13CZV-0011-R10b-SM-5LZYD 24.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 23.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 23.6
GTEX-13NYB-0011-R10a-SM-5KM43 23.4
GTEX-145MG-0011-R10a-SM-5PNWG 23.4
GTEX-Z93S-0011-R10a-SM-4RGNM 23.0
GTEX-WZTO-0011-R10B-SM-4E3KB 22.9
GTEX-131XH-0011-R10a-SM-5EGLJ 22.6
GTEX-14BIN-0011-R10a-SM-5S2UA 22.6
GTEX-12126-0011-R10b-SM-5BC6T 21.4
GTEX-13SLX-0011-R10a-SM-5P9HV 20.9
GTEX-YFC4-0011-R10a-SM-4SOK5 19.9
GTEX-T6MN-0011-R10A-SM-32QP7 19.0
GTEX-NL3H-0011-R10A-SM-2I3E9 17.5
GTEX-WVLH-0011-R10A-SM-3MJFM 17.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 17.3
GTEX-145MH-0011-R10b-SM-5PNUK 16.9
GTEX-1313W-0011-R10b-SM-5DUXA 15.8
GTEX-WL46-0011-R10A-SM-3MJFQ 15.0
GTEX-12WSE-0011-R10b-SM-5P9JV 6.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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