Tissue expression of VIM - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	517.5	TPM
GTEx:	81.0	RPKM
FANTOM5:	1003.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Squamous epithelial cells	Not detected	Not detected	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	517.5

Female, age 70

Sample 1
TPM: 445.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 605.9

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 500.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	81.0

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 81.0

Samples: 286

Max RPKM: 373.2
Min RPKM: 17.1
Std RPKM: 51.6
Median RPKM: 66

GTEX-X585-1226-SM-46MW7

373.2

GTEX-145LS-1826-SM-5LUAZ

317.9

GTEX-R45C-1226-SM-48FEE

307.0

GTEX-ZZPT-1426-SM-5N9C5

306.2

GTEX-P4PP-0626-SM-3NM9X

288.8

GTEX-XMD2-1326-SM-4YCET

247.9

GTEX-144GO-2726-SM-5O9A2

209.0

GTEX-RTLS-1126-SM-46MUQ

199.6

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	1003.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 1003.0

FF:10015-101C6

68,74,75 years, mixed

1003.0