Tissue expression of VIM - Staining in skin

SKIN - Expression summary

Protein expression

RNA expression

HPA:	710.7	TPM
GTEx:	314.7	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	High
Keratinocytes:	Not detected
Langerhans:	High
Melanocytes:	High

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Fibroblasts	High	High	High
Keratinocytes	Not detected	Not detected	Not detected
Langerhans	High	High	High
Melanocytes	Medium	High	Medium

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Not detected

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Epidermal cells	Medium	Not detected	Low

SKIN - HPA RNA-seq

Average TPM	710.7

Female, age 34

Sample 1
TPM: 777.2

Cell types%

Keratinocytes: 60
Other cell types: 40

Female, age 30

Sample 2
TPM: 531.9

Cell types%

Keratinocytes: 55
Other cell types: 45

Male, age 57

Sample 3
TPM: 823.1

SKIN - GTEx RNA-seq

Average RPKM	314.7

GTEx sample id

RPKM

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 286.0

Samples: 250

Max RPKM: 665.7
Min RPKM: 62.6
Std RPKM: 128.8
Median RPKM: 267.9

GTEX-ZYW4-0626-SM-59HJR

665.7

GTEX-14BMU-1226-SM-5S2OR

662.7

GTEX-131XE-1626-SM-5K7VO

660.9

GTEX-13113-1626-SM-5EQ4I

624.4

GTEX-YB5K-2026-SM-4VDT3

621.9

GTEX-13QBU-1226-SM-5LU4G

618.8

GTEX-Y3IK-1626-SM-4YCF5

616.9

GTEX-ZVTK-0226-SM-51MRG

603.8

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Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 334.8

Samples: 357

Max RPKM: 908.8
Min RPKM: 88.8
Std RPKM: 135.5
Median RPKM: 323.5

GTEX-11EMC-2926-SM-5EQ4F

908.8

GTEX-1192X-0226-SM-5H12D

861.9

GTEX-14BIL-0126-SM-5SI92

835.3

GTEX-11TTK-0126-SM-5987B

811.6

GTEX-PLZ4-0126-SM-5SI8O

793.7

GTEX-QDT8-0126-SM-48TZ1

739.0

GTEX-ZUA1-0126-SM-5GU76

654.6

GTEX-SSA3-0126-SM-32QPU

616.1

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SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue