Tissue expression of VIM - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	316.9	TPM
GTEx:	180.6	RPKM
FANTOM5:	437.5	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Not detected

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Glandular cells	Not detected	Low	Not detected

SMALL INTESTINE - HPA RNA-seq

Average TPM	316.9

Male, age 65

Sample 1
TPM: 217.8

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 287.2

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 404.3

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 358.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	180.6

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 180.6

Samples: 88

Max RPKM: 733
Min RPKM: 28
Std RPKM: 123.6
Median RPKM: 142.8

GTEX-1192X-2526-SM-59868

733.0

GTEX-13OVI-1926-SM-5IJCG

681.1

GTEX-ZC5H-2326-SM-4WAYT

428.2

GTEX-148VJ-2226-SM-5NQ9M

419.4

GTEX-XMK1-1826-SM-4B66F

389.0

GTEX-117YX-0326-SM-5GICL

380.3

GTEX-WFG8-1626-SM-4LVMB

373.4

GTEX-111CU-1326-SM-5NQ8L

335.3

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	437.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 437.5

FF:10024-101D6

15,40,85 years, mixed

437.5