Tissue expression of VIM - Staining in spleen

SPLEEN - Expression summary

Protein expression

RNA expression

HPA:	1165.5	TPM
GTEx:	257.4	RPKM
FANTOM5:	1249.5	Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:	High
Cells in white pulp:	Medium

Antibody staining	Antibody HPA001762	Antibody CAB000080	Antibody CAB058687
Cells in red pulp	High	High	High
Cells in white pulp	Medium	High	Low

SPLEEN - HPA RNA-seq

Average TPM	1165.5

Female, age 60

Sample 1
TPM: 1303.7

Cell types%

Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10

Male, age 17

Sample 2
TPM: 1157.3

Cell types%

Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5

Male, age 20

Sample 3
TPM: 968.1

Cell types%

Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10

Female, age 19

Sample 4
TPM: 1202.9

Cell types%

Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5

Female, age 65

Sample 5
TPM: 1195.2

Cell types%

Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM	257.4

GTEx sample id

RPKM

Spleen

Spleen
RPKM: 257.4

Samples: 104

Max RPKM: 477.1
Min RPKM: 157.5
Std RPKM: 59.3
Median RPKM: 252

GTEX-XPVG-0626-SM-4B65B

477.1

GTEX-UJHI-0126-SM-4IHLP

413.6

GTEX-X585-1826-SM-4QAS3

406.2

GTEX-ZZPU-0126-SM-5E446

386.5

GTEX-PLZ6-0126-SM-48TC6

382.1

GTEX-13X6H-0726-SM-5Q5BX

380.4

GTEX-POMQ-0126-SM-48TD6

368.5

GTEX-U3ZN-0126-SM-4DXUM

361.1

Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million	1249.5

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 1249.5

FF:10025-101D7

39,50,70 years, male

1249.5