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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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RNASET2
  • TISSUE

  • CELL

  • CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

Ribonuclease T2

Protein class

Disease related genes, Predicted intracellular proteins, Predicted secreted proteins

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Endometrial cancer

STAINING SUMMARY

HPA029013
HPA066509

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Distinct cytoplasmic positivity with a granular pattern was observed in a few cases of several cancers including endometrial, colorectal, breast, and renal carcinomas. Remaining cancer tissues were negative.

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Weak to moderate cytoplasmic immunoreactivity was observed in most cancer tissues. Lymphomas were strongly stained. Carcinoids, gliomas, prostate, testicular and liver cancers were mostly negative.

GENE INFORMATION

Gene name

RNASET2 (HGNC Symbol)

Synonyms

bA514O12.3, FLJ10907, RNASE6PL

Description

Ribonuclease T2 (HGNC Symbol)

Entrez gene summary

This ribonuclease gene is a novel member of the Rh/T2/S-glycoprotein class of extracellular ribonucleases. It is a single copy gene that maps to 6q27, a region associated with human malignancies and chromosomal rearrangement. [provided by RefSeq, Jul 2008]

Chromosome

6

Cytoband

q27

Chromosome location (bp)

166929504 - 166957191

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000026297 (version 83.38)

Entrez gene

8635

UniProt

O00584 (UniProt - Evidence at protein level)

neXtProt

NX_O00584

Antibodypedia

RNASET2 antibodies

PROTEIN BROWSER

RNASET2-001
RNASET2-004
RNASET2-006
RNASET2-007
RNASET2-201
RNASET2-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RNASET2-001
ENSP00000426455
ENST00000508775
O00584 [Direct mapping]
Ribonuclease T2
Show all
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0004521 [endoribonuclease activity]
GO:0004540 [ribonuclease activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005764 [lysosome]
GO:0005788 [endoplasmic reticulum lumen]
GO:0006401 [RNA catabolic process]
GO:0033897 [ribonuclease T2 activity]
GO:0043202 [lysosomal lumen]
GO:0070062 [extracellular exosome]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
Show all
256 aa
29.5 kDa
Yes 0
RNASET2-004
ENSP00000426059
ENST00000478180
D6RHI9 [Direct mapping]
Ribonuclease T2
Show all
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0004521 [endoribonuclease activity]
GO:0033897 [ribonuclease T2 activity]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
Show all
254 aa
29.2 kDa
Yes 0
RNASET2-006
ENSP00000422846
ENST00000476238
O00584 [Direct mapping]
Ribonuclease T2
Show all
   MEMSAT3 predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Disease related genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0004521 [endoribonuclease activity]
GO:0004540 [ribonuclease activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005764 [lysosome]
GO:0005788 [endoplasmic reticulum lumen]
GO:0006401 [RNA catabolic process]
GO:0033897 [ribonuclease T2 activity]
GO:0043202 [lysosomal lumen]
GO:0070062 [extracellular exosome]
GO:0090501 [RNA phosphodiester bond hydrolysis]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
Show all
256 aa
29.5 kDa
Yes 0
RNASET2-007
ENSP00000424947
ENST00000366855
D6REQ6 [Direct mapping]
Ribonuclease T2; Ribonuclease T2, isoform CRA_c
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0004521 [endoribonuclease activity]
GO:0033897 [ribonuclease T2 activity]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
Show all
218 aa
25.3 kDa
No 0
RNASET2-201
ENSP00000480244
ENST00000611959
A0A087WWI1 [Direct mapping]
Ribonuclease T2
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0004521 [endoribonuclease activity]
GO:0033897 [ribonuclease T2 activity]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
Show all
238 aa
26.3 kDa
Yes 0
RNASET2-202
ENSP00000482755
ENST00000620173
A0A087WZM2 [Direct mapping]
Ribonuclease T2
Show all
   MEMSAT3 predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0004521 [endoribonuclease activity]
GO:0033897 [ribonuclease T2 activity]
GO:0090502 [RNA phosphodiester bond hydrolysis, endonucleolytic]
Show all
306 aa
34.9 kDa
Yes 0

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