Tissue expression of CD44 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	207.9	TPM
GTEx:	33.0	RPKM
FANTOM5:	273.3	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Glandular cells:	High
Myoepithelial cells:	Not detected

Antibody staining	Antibody HPA005785	Antibody CAB000112	Antibody CAB000316
Adipocytes	Not detected	Not detected	Medium
Glandular cells	High	High	Medium
Myoepithelial cells	Not detected	High	Not detected

BREAST - HPA RNA-seq

Average TPM	207.9

Female, age 52

Sample 1
TPM: 146.0

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 255.6

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 294.1

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 136.1

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	33.0

GTEx sample id

RPKM

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 33.0

Samples: 214

Max RPKM: 93.1
Min RPKM: 7.5
Std RPKM: 14.6
Median RPKM: 30.2

GTEX-R55F-1726-SM-2TF4R

93.1

GTEX-13PVQ-1026-SM-5KM3M

83.7

GTEX-13O3O-0826-SM-5K7WE

76.2

GTEX-T5JC-2126-SM-32PMO

69.8

GTEX-QEG5-0726-SM-4R1JQ

68.5

GTEX-13OW5-2226-SM-5L3HC

65.4

GTEX-13NZB-2126-SM-5MR4Y

62.9

GTEX-11OF3-1926-SM-59889

60.9

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	273.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 273.3

FF:10080-102A8

77 years, female

273.3