Tissue expression of PNPLA6 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	43.4	TPM
GTEx:	26.6	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Low
Neuronal cells:	Medium
Neuropil:	High

Antibody staining	Antibody HPA007522
Endothelial cells	Low
Glial cells	Low
Neuronal cells	Medium
Neuropil	High

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	43.4

Male, age 5

Sample 1
TPM: 41.5

Female, age 40

Sample 2
TPM: 34.6

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 54.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	26.6

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 29.6

Samples: 114

Max RPKM: 46.4
Min RPKM: 16.2
Std RPKM: 6.1
Median RPKM: 29.6

GTEX-1192X-3126-SM-5N9BY

46.4

GTEX-ZZPT-3026-SM-5GZXH

45.8

GTEX-X4XX-3026-SM-3NMB2

45.2

GTEX-X585-3026-SM-46MWF

43.8

GTEX-13NYS-3126-SM-5KLYV

43.5

GTEX-13OW8-2826-SM-5L3GC

39.9

GTEX-NPJ8-1526-SM-2D7VU

39.9

GTEX-13SLX-3126-SM-5S2Q5

39.3

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 23.5

Samples: 108

Max RPKM: 44.4
Min RPKM: 11.4
Std RPKM: 6.6
Median RPKM: 24.6

GTEX-13NYS-0011-R10a-SM-5MR4S

44.4

GTEX-X4XX-0011-R10B-SM-46MWO

38.6

GTEX-X585-0011-R10A-SM-46MUY

37.1

GTEX-13RTJ-0011-R10b-SM-5O9CW

33.7

GTEX-NL3H-0011-R10A-SM-2I3E9

33.7

GTEX-13OW7-0011-R10a-SM-5L3H3

33.6

GTEX-NPJ8-0011-R10A-SM-2YUMO

32.7

GTEX-13N1W-0011-R10b-SM-5MR4H

32.1

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue