We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PNPLA6
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:40.1TPM
GTEx:43.5RPKM
FANTOM5:28.4Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA007522

 

Cells in red pulp

Low  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

40.1

overview Female, age 60
Sample 1
TPM: 40.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 55.5
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 41.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 47.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 15.3
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

43.5

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 43.5
Samples: 104

Max RPKM: 77.3
Min RPKM: 26
Std RPKM: 9.3
Median RPKM: 42.9
GTEX-UJHI-0126-SM-4IHLP 77.3
GTEX-13S86-0126-SM-5S2PI 73.6
GTEX-Q734-0226-SM-48U1A 71.7
GTEX-O5YT-0926-SM-48TDG 68.7
GTEX-12WSN-0126-SM-5DUX5 63.6
GTEX-UPK5-1626-SM-4JBHI 56.3
GTEX-QV44-0126-SM-4R1KH 56.0
GTEX-RUSQ-0126-SM-47JWV 55.7
GTEX-13X6H-0726-SM-5Q5BX 55.1
GTEX-XV7Q-0126-SM-4BRVK 53.6
GTEX-OIZH-0926-SM-48TBR 53.4
GTEX-XAJ8-0126-SM-47JYG 53.4
GTEX-U4B1-0526-SM-4DXTK 52.2
GTEX-1399R-0226-SM-5IJGG 52.1
GTEX-P4QS-0926-SM-48TBS 52.1
GTEX-ZV6S-0826-SM-5NQ6Z 52.1
GTEX-12WSJ-0526-SM-5GCOZ 51.2
GTEX-139YR-0426-SM-5IFFV 50.3
GTEX-XXEK-0126-SM-4BRVU 50.1
GTEX-11EQ9-0426-SM-5A5JY 49.9
GTEX-X585-1826-SM-4QAS3 49.5
GTEX-Y3I4-0126-SM-4TT26 49.5
GTEX-Z9EW-0726-SM-5HL9H 49.3
GTEX-XPVG-0626-SM-4B65B 48.3
GTEX-VJYA-0126-SM-4KL1P 47.9
GTEX-131XE-1126-SM-5EGHW 47.7
GTEX-POMQ-0126-SM-48TD6 47.7
GTEX-S4Z8-0226-SM-4AD5K 47.5
GTEX-S3XE-0626-SM-4AD6B 47.4
GTEX-145MN-0126-SM-5RQHY 47.2
GTEX-U3ZH-0126-SM-4DXUK 47.0
GTEX-WFON-0126-SM-4LVM9 47.0
GTEX-132QS-0226-SM-5IFFZ 46.6
GTEX-QLQW-0126-SM-447BK 46.6
GTEX-ZZPU-0126-SM-5E446 46.5
GTEX-ZDTT-1026-SM-5KM19 46.4
GTEX-11LCK-0126-SM-5A5M5 46.3
GTEX-XQ8I-1726-SM-4BOQB 46.3
GTEX-YB5E-0426-SM-5IFHR 46.2
GTEX-XUJ4-0226-SM-4BOP8 46.1
GTEX-ZVZP-0726-SM-59HKA 46.0
GTEX-WHWD-0126-SM-4OORS 45.6
GTEX-11NSD-0426-SM-5N9CR 45.4
GTEX-Q2AH-0226-SM-48U1I 45.4
GTEX-X3Y1-0126-SM-4PQZA 45.3
GTEX-ZVP2-0526-SM-51MSC 44.6
GTEX-QV31-0126-SM-447BP 44.4
GTEX-146FQ-0626-SM-5LU9U 43.7
GTEX-131XG-0426-SM-5IFGD 43.3
GTEX-PW2O-0126-SM-48TC8 43.1
GTEX-144GN-2126-SM-5O99D 43.0
GTEX-XGQ4-0126-SM-4AT4H 42.9
GTEX-ZYWO-0226-SM-5GZX3 42.9
GTEX-OOBJ-0926-SM-48TDO 42.5
GTEX-Y5LM-0326-SM-4VBRN 42.0
GTEX-XMK1-0126-SM-4B65F 41.8
GTEX-YFCO-0926-SM-5LUA5 41.8
GTEX-YB5K-1926-SM-4VDT4 41.6
GTEX-13111-0126-SM-5EGHO 41.1
GTEX-12BJ1-0726-SM-5EGGF 40.8
GTEX-R55G-0226-SM-48FEI 40.7
GTEX-PLZ6-0126-SM-48TC6 40.6
GTEX-ZAB5-0526-SM-5CVMU 40.6
GTEX-12WSG-0926-SM-5EGIH 39.8
GTEX-QDVN-0526-SM-48TZ4 39.7
GTEX-13VXT-1326-SM-5LU3Y 39.5
GTEX-T5JW-0126-SM-4DM6K 39.3
GTEX-ZLWG-0426-SM-4WWFA 39.3
GTEX-W5WG-0626-SM-4SOID 39.2
GTEX-U3ZN-0126-SM-4DXUM 39.1
GTEX-ZLFU-0526-SM-4WWBN 38.9
GTEX-11XUK-0426-SM-5EQML 38.7
GTEX-13CF3-0226-SM-5J1NW 38.5
GTEX-14E6E-1226-SM-5S2R5 38.3
GTEX-117YX-2126-SM-5GIEL 37.9
GTEX-ZYFG-0726-SM-5GIDX 37.9
GTEX-1399S-0226-SM-5IFFG 37.7
GTEX-146FR-1926-SM-5NQA6 37.5
GTEX-QMRM-0226-SM-4R1K7 37.4
GTEX-1122O-0526-SM-5N9DM 36.4
GTEX-X4LF-0226-SM-4QAS8 36.4
GTEX-1211K-0426-SM-5FQTP 36.1
GTEX-PX3G-0926-SM-48U12 35.6
GTEX-ZP4G-0326-SM-4YCEF 34.9
GTEX-13PL7-1126-SM-5MR5O 34.8
GTEX-12WSK-0126-SM-5GCO7 34.7
GTEX-11DXX-0726-SM-5H12X 34.4
GTEX-13PVR-0326-SM-5RQJY 34.3
GTEX-147F3-0126-SM-5NQBJ 34.2
GTEX-QCQG-0226-SM-48U28 34.2
GTEX-11VI4-0126-SM-5GU6Z 34.1
GTEX-Y8LW-0126-SM-4VBS1 33.7
GTEX-139T6-0226-SM-5IFGZ 32.9
GTEX-13FH7-1326-SM-5IFG8 32.7
GTEX-YEC4-0126-SM-4W21T 31.8
GTEX-13U4I-1626-SM-5IFFR 31.7
GTEX-ZPU1-1026-SM-4YCEQ 31.7
GTEX-11P7K-0426-SM-5BC5H 31.0
GTEX-13N11-0126-SM-5KM2Z 31.0
GTEX-11P81-1326-SM-5GU5S 30.2
GTEX-P4PP-0926-SM-48TBZ 29.1
GTEX-14DAR-0326-SM-5S2PS 28.1
GTEX-Y3IK-0126-SM-4WWE9 27.3
GTEX-Y114-0726-SM-4TT6U 26.0
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

28.4

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 28.4
FF:10025-101D7 39,50,70 years, male 28.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.