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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:102.0TPM
GTEx:51.0RPKM
FANTOM5:188.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
Chondrocytes:Medium
 

Antibody staining

Antibody HPA002131

  

Antibody CAB002453

  

Adipocytes

 Medium   Low  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Medium   Low  

Chondrocytes

 Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
 
 
 

Antibody staining

Antibody HPA002131

  

Antibody CAB002453

  

Adipocytes

 Medium   Low  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Low  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

102.0
N/A Female, age 80
Sample 1
TPM: 83.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 78.9
N/A Female, age 57
Sample 3
TPM: 70.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 148.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 128.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

51.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 57.9
Samples: 350

Max RPKM: 185.4
Min RPKM: 20.5
Std RPKM: 22.2
Median RPKM: 52.7
GTEX-13OW6-0526-SM-5L3HY 185.4
GTEX-11DXW-0326-SM-5H11W 152.1
GTEX-QEG4-0326-SM-5S2UQ 130.2
GTEX-YECK-0226-SM-4W215 130.0
GTEX-14C5O-0226-SM-5SI6O 126.0
GTEX-13111-1726-SM-5EGJZ 122.6
GTEX-SIU8-0226-SM-2XCDS 120.9
GTEX-13CF2-2626-SM-5LZZA 116.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 40.2
Samples: 227

Max RPKM: 117.3
Min RPKM: 19.3
Std RPKM: 13.3
Median RPKM: 37.3
GTEX-13OW7-1126-SM-5K7V6 117.3
GTEX-WOFM-0726-SM-3MJF8 116.6
GTEX-11ZUS-1826-SM-5FQTR 90.7
GTEX-ZEX8-1226-SM-5S2OK 84.6
GTEX-113JC-0726-SM-5GZZR 73.2
GTEX-UPK5-1826-SM-3GAEB 69.8
GTEX-11ZTS-1326-SM-5EQMA 64.9
GTEX-ZVP2-0226-SM-57WBD 64.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

188.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 188.1
FF:10010-101C1 65,65,76 years, mixed 188.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.