We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
VCL
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:44.2TPM
GTEx:42.8RPKM
FANTOM5:118.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA002131

 

Antibody CAB002453

 

Adipocytes

Not detected   Not detected  

Glandular cells

High   Medium  

Myoepithelial cells

High   Medium  
   
   
   

BREAST - HPA RNA-seq

Average TPM

44.2

overview Female, age 52
Sample 1
TPM: 34.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 59.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 35.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 46.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

42.8

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 42.8
Samples: 214

Max RPKM: 99.1
Min RPKM: 17
Std RPKM: 12.6
Median RPKM: 41.1
GTEX-YJ8O-2226-SM-5IFHW 99.1
GTEX-ZF3C-2326-SM-5S2MZ 76.4
GTEX-T2IS-1526-SM-32QPR 75.0
GTEX-144GL-2026-SM-5LU3O 74.8
GTEX-W5X1-2326-SM-3GIL6 73.7
GTEX-VJWN-0726-SM-3GIJ8 73.2
GTEX-R3RS-0626-SM-48FE1 71.5
GTEX-WOFL-0826-SM-3MJG1 70.5
GTEX-12WSM-1726-SM-5BC6J 68.3
GTEX-TML8-1226-SM-32QON 68.3
GTEX-147F4-2826-SM-5NQBN 67.2
GTEX-XOT4-0726-SM-4GIAW 66.9
GTEX-REY6-2426-SM-48FF5 66.7
GTEX-13OW8-0226-SM-5K7UP 66.5
GTEX-ZYFC-0826-SM-5E44K 66.4
GTEX-11WQK-2426-SM-5GU5C 65.2
GTEX-11DXW-0626-SM-5N9ER 60.7
GTEX-QVJO-1826-SM-447C9 60.7
GTEX-R53T-1526-SM-48FEK 60.3
GTEX-S7SE-0826-SM-4AT4D 59.8
GTEX-Y111-2026-SM-4SOJA 59.7
GTEX-11DXY-2326-SM-5GICW 59.2
GTEX-1313W-0826-SM-5EQ4T 59.2
GTEX-1314G-1226-SM-5BC6D 59.2
GTEX-QDT8-0626-SM-48TYW 58.9
GTEX-SE5C-2126-SM-4BRUJ 57.0
GTEX-WRHU-0326-SM-3MJFY 56.8
GTEX-WYBS-0926-SM-3NM94 56.7
GTEX-12WSK-2226-SM-5GCO5 56.0
GTEX-Y3I4-1526-SM-4TT7K 55.7
GTEX-13O3O-0826-SM-5K7WE 55.6
GTEX-X4EP-2926-SM-3P5YQ 55.4
GTEX-11O72-2126-SM-5N9FO 55.0
GTEX-ZU9S-1926-SM-5NQBP 54.8
GTEX-ZVT4-1026-SM-57WC4 54.7
GTEX-Y5V5-2126-SM-4WWFO 54.0
GTEX-11P7K-0726-SM-5EGKX 53.9
GTEX-RU72-0626-SM-46MUI 53.8
GTEX-13PVQ-1026-SM-5KM3M 53.5
GTEX-13O3Q-2226-SM-5KM4O 53.3
GTEX-XMD2-0926-SM-4WWEF 51.9
GTEX-T5JW-2026-SM-4DM63 51.8
GTEX-13CF2-2026-SM-5K7VI 51.6
GTEX-Q2AG-0326-SM-48U1O 51.6
GTEX-11EI6-0626-SM-5985T 51.4
GTEX-RUSQ-2026-SM-4GIAK 51.1
GTEX-WI4N-1426-SM-3LK7H 51.1
GTEX-WXYG-2226-SM-4E3IM 51.1
GTEX-TKQ2-1826-SM-33HB2 50.9
GTEX-11GS4-2126-SM-5A5KR 50.8
GTEX-11OF3-1926-SM-59889 50.8
GTEX-RWS6-1926-SM-47JXY 50.7
GTEX-TKQ1-0226-SM-33HB5 50.5
GTEX-11WQC-1726-SM-5GU4W 50.3
GTEX-11ZUS-0826-SM-5FQUY 50.3
GTEX-13OW5-2226-SM-5L3HC 50.3
GTEX-14E6E-1326-SM-5S2NR 50.3
GTEX-11TUW-1826-SM-5BC5D 50.2
GTEX-1269C-2426-SM-5FQSN 50.2
GTEX-132NY-0826-SM-5K7Y7 49.2
GTEX-13N1W-0626-SM-5MR4U 49.1
GTEX-146FH-0826-SM-5SI8T 48.8
GTEX-U3ZH-1426-SM-4DXSR 48.8
GTEX-13113-1726-SM-5GCOO 48.4
GTEX-S32W-2026-SM-4AD6E 48.3
GTEX-ZF29-1926-SM-5S2P1 48.3
GTEX-11EQ9-1826-SM-5Q5AJ 48.0
GTEX-13W3W-1226-SM-5LU4H 47.9
GTEX-X261-0626-SM-3NMD9 47.6
GTEX-XV7Q-2326-SM-4BRVZ 47.6
GTEX-ZEX8-2226-SM-57WC6 47.1
GTEX-145MN-1926-SM-5SIAI 46.8
GTEX-11NV4-2026-SM-5N9DG 46.5
GTEX-Y3IK-2326-SM-4WWDT 46.4
GTEX-1117F-2826-SM-5GZXL 46.3
GTEX-ZDXO-0126-SM-5S2ND 46.2
GTEX-13W46-0826-SM-5LU3H 46.1
GTEX-WFON-1826-SM-3GILG 46.1
GTEX-12WSN-1326-SM-5GCNT 45.7
GTEX-ZLV1-1426-SM-4WWES 45.5
GTEX-ZY6K-1626-SM-5GZWV 45.5
GTEX-S4P3-1326-SM-4AD6V 45.4
GTEX-ZVZQ-0826-SM-51MRF 45.4
GTEX-R55F-1726-SM-2TF4R 45.1
GTEX-12WSB-0626-SM-59HJO 44.9
GTEX-YFC4-1426-SM-5IFJG 44.6
GTEX-X15G-1626-SM-3NMB3 44.5
GTEX-12ZZX-1126-SM-5EGKB 44.1
GTEX-ZUA1-1526-SM-59HLS 44.1
GTEX-12KS4-0126-SM-5Q5A5 43.8
GTEX-UPK5-2326-SM-3P5Z8 43.8
GTEX-13O3P-0826-SM-5L3DH 43.3
GTEX-UJHI-1426-SM-3DB9C 43.3
GTEX-13NZ8-0126-SM-5IJCT 43.2
GTEX-XBED-1626-SM-47JYN 43.0
GTEX-144GM-0926-SM-5O994 42.5
GTEX-XYKS-1326-SM-4BRUN 42.5
GTEX-ZF2S-2026-SM-5E461 42.5
GTEX-U8XE-0826-SM-4E3J1 41.7
GTEX-T6MO-0326-SM-32QOK 41.5
GTEX-ZV7C-1826-SM-5NQ83 41.5
GTEX-13QIC-2326-SM-5LU5N 41.4
GTEX-Y9LG-1426-SM-5IFJZ 41.4
GTEX-YEC3-1026-SM-5IFI5 41.4
GTEX-T5JC-2126-SM-32PMO 41.3
GTEX-ZPIC-1126-SM-5BC7F 41.3
GTEX-11EMC-2026-SM-5A5JV 41.1
GTEX-13O61-1826-SM-5KM4I 41.1
GTEX-X4XY-0926-SM-4E3JD 41.1
GTEX-11P81-1926-SM-5BC53 41.0
GTEX-13PL6-2926-SM-5L3I2 40.9
GTEX-WYJK-1326-SM-3NB2T 40.8
GTEX-T6MN-0726-SM-32PML 40.7
GTEX-11PRG-0826-SM-5EQ6A 40.2
GTEX-145MO-0826-SM-5NQBL 40.2
GTEX-WY7C-2726-SM-3NB3P 40.0
GTEX-XQ3S-1326-SM-4BOPQ 40.0
GTEX-ZV6S-1826-SM-5NQ8D 40.0
GTEX-S33H-0326-SM-4AD6N 39.5
GTEX-11P82-1326-SM-5HL62 39.1
GTEX-13NZ9-1026-SM-5MR5K 38.9
GTEX-1122O-1226-SM-5H113 38.6
GTEX-131YS-0626-SM-5EGKL 38.3
GTEX-117XS-1926-SM-5GICO 38.2
GTEX-Y8LW-1626-SM-5IFHX 38.2
GTEX-T2YK-2226-SM-32QPT 38.1
GTEX-139T8-0826-SM-5L3DE 38.0
GTEX-ZZPU-0626-SM-5E43T 37.7
GTEX-ZYWO-2326-SM-5GZY4 37.5
GTEX-S4Q7-1126-SM-4AD6R 37.0
GTEX-XUW1-2326-SM-4BOO5 37.0
GTEX-ZYT6-0126-SM-5E45J 37.0
GTEX-14753-2426-SM-5LU8U 36.9
GTEX-Y8E4-1626-SM-5S2MW 36.7
GTEX-WYVS-1726-SM-3NMAY 36.6
GTEX-XUJ4-1926-SM-4BOOV 36.6
GTEX-13FTY-2226-SM-5J1ND 36.5
GTEX-ZDYS-1126-SM-5K7UB 36.4
GTEX-S341-1526-SM-4AD6K 35.6
GTEX-TMMY-0726-SM-33HBE 35.6
GTEX-1211K-1926-SM-5EQLB 35.5
GTEX-U3ZN-1926-SM-4DXSG 35.5
GTEX-ZXES-0826-SM-5E43C 35.5
GTEX-11ONC-2126-SM-5HL6E 35.3
GTEX-13N11-1726-SM-5J1OJ 35.3
GTEX-SIU7-1626-SM-4BRUK 35.0
GTEX-ZVE2-1226-SM-5NQ8R 34.9
GTEX-ZYW4-0826-SM-5GIDG 34.9
GTEX-VUSG-2226-SM-4KKZO 34.8
GTEX-13FTX-1126-SM-5N9EN 34.7
GTEX-117YX-1426-SM-5H12H 34.6
GTEX-11DXZ-1926-SM-5GZZL 34.6
GTEX-12BJ1-1826-SM-5HL9N 34.5
GTEX-YB5E-1726-SM-5IFJ3 34.5
GTEX-ZC5H-2626-SM-5J2MG 34.5
GTEX-ZQG8-0726-SM-5P9H9 34.4
GTEX-132AR-0826-SM-5EGK6 34.0
GTEX-ZZ64-1226-SM-5E43R 33.9
GTEX-ZAJG-0626-SM-5HL8X 33.8
GTEX-11EM3-1326-SM-5N9C6 33.7
GTEX-13FTW-1426-SM-5LZWZ 33.6
GTEX-XUZC-1626-SM-4BRVP 33.5
GTEX-ZVT2-1826-SM-5NQ8W 33.4
GTEX-11NSD-0926-SM-5N9DR 33.2
GTEX-R55D-0826-SM-48FEA 33.0
GTEX-1399U-1826-SM-5PNZ1 32.7
GTEX-133LE-1726-SM-5K7VQ 32.6
GTEX-YB5K-1626-SM-5IFIN 32.6
GTEX-ZTX8-1226-SM-4YCE9 32.6
GTEX-XGQ4-0926-SM-4AT4U 32.4
GTEX-XMK1-1126-SM-4IHJ8 32.3
GTEX-111YS-1926-SM-5GICC 32.2
GTEX-XQ8I-2426-SM-4WAXY 32.1
GTEX-QMRM-1626-SM-4R1KV 31.7
GTEX-ZDTT-2126-SM-5S2OJ 31.7
GTEX-UTHO-1026-SM-3GAF7 31.6
GTEX-XMD1-0826-SM-4AT52 31.5
GTEX-ZVTK-0326-SM-51MRR 31.5
GTEX-QEG5-0726-SM-4R1JQ 30.9
GTEX-S4UY-0726-SM-4AD6X 30.9
GTEX-11LCK-2426-SM-5HL5F 30.8
GTEX-11TT1-2126-SM-5GU5Y 30.6
GTEX-ZAB4-2526-SM-5HL8M 30.2
GTEX-13CF3-2126-SM-5IFJP 30.1
GTEX-11DZ1-0326-SM-5N9BN 29.9
GTEX-11ZTT-2326-SM-5EQLG 29.7
GTEX-11I78-2226-SM-5PNYA 29.5
GTEX-145ME-1526-SM-5Q5F2 29.1
GTEX-ZLFU-2126-SM-4WWEV 29.0
GTEX-13D11-1026-SM-5IJFB 28.9
GTEX-ZQUD-1926-SM-51MSA 28.6
GTEX-Y5LM-1726-SM-4VDSX 28.5
GTEX-131XW-0726-SM-5EGK3 28.2
GTEX-Y114-2026-SM-4TT7L 28.2
GTEX-QEL4-2126-SM-447AE 28.1
GTEX-U412-1826-SM-4DXTJ 28.0
GTEX-11GSO-1926-SM-5A5K3 27.8
GTEX-YFCO-1826-SM-4W1YH 27.8
GTEX-139T6-1626-SM-5PNYZ 27.4
GTEX-ZA64-1526-SM-5CVMD 26.9
GTEX-ZWKS-2826-SM-5NQ74 26.8
GTEX-13FHO-0826-SM-5L3E8 26.7
GTEX-ZT9W-2026-SM-51MRA 26.7
GTEX-14AS3-1626-SM-5S2OY 26.5
GTEX-Y5V6-2126-SM-4WWFX 26.4
GTEX-ZTTD-1026-SM-51MRD 26.4
GTEX-1192X-2326-SM-5987X 25.9
GTEX-13NZB-2126-SM-5MR4Y 25.4
GTEX-139TU-0626-SM-5KM3X 24.0
GTEX-13S86-1226-SM-5S2OA 24.0
GTEX-145LT-0726-SM-5S2VM 22.2
GTEX-PSDG-1626-SM-48TCQ 22.2
GTEX-132Q8-1426-SM-5EGK7 18.1
GTEX-14ABY-2126-SM-5QGQZ 17.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

118.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 118.6
FF:10080-102A8 77 years, female 118.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.