Tissue expression of VCL - Staining in small intestine

SMALL INTESTINE - Expression summary

Protein expression

RNA expression

HPA:	43.2	TPM
GTEx:	41.2	RPKM
FANTOM5:	163.9	Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:

Medium

Antibody staining	Antibody HPA002131	Antibody CAB002453
Glandular cells	Low	Medium

SMALL INTESTINE - HPA RNA-seq

Average TPM	43.2

Male, age 65

Sample 1
TPM: 27.2

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 39

Sample 2
TPM: 43.5

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 68

Sample 3
TPM: 57.1

Cell types%

Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55

Male, age 85

Sample 4
TPM: 45.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM	41.2

GTEx sample id

RPKM

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 41.2

Samples: 88

Max RPKM: 162.6
Min RPKM: 14.6
Std RPKM: 31.7
Median RPKM: 28.2

GTEX-ZF2S-1726-SM-57WFT

162.6

GTEX-XMK1-1826-SM-4B66F

157.3

GTEX-ZQUD-0926-SM-57WE3

131.8

GTEX-WEY5-1526-SM-4LMJF

130.3

GTEX-117YX-0326-SM-5GICL

123.3

GTEX-111CU-1326-SM-5NQ8L

112.1

GTEX-12WSK-1526-SM-5CVNO

102.8

GTEX-13111-1426-SM-5DUW3

98.0

Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million	163.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 163.9

FF:10024-101D6

15,40,85 years, mixed

163.9