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TPR

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.7TPM
GTEx:18.7RPKM
FANTOM5:55.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Medium
Fibroblasts:Medium
Adipocytes:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA019661

  

Antibody HPA019663

  

Antibody HPA024336

  

Chondrocytes

 High  

Fibroblasts

 Medium   Not detected   High  

Adipocytes

 Not detected   Medium  

Peripheral nerve

 Not detected   Medium  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA019661

  

Antibody HPA019663

  

Antibody HPA024336

  

Adipocytes

 Medium   Not detected   Medium  

Fibroblasts

 Medium   Medium   Medium  

Peripheral nerve

 Medium  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

20.7
N/A Female, age 80
Sample 1
TPM: 19.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 17.5
N/A Female, age 57
Sample 3
TPM: 17.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 25.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 23.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

18.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 20.0
Samples: 350

Max RPKM: 30.9
Min RPKM: 10
Std RPKM: 3
Median RPKM: 20.1
GTEX-TSE9-0226-SM-3DB84 30.9
GTEX-QEL4-0326-SM-3GAE5 27.7
GTEX-OIZI-0226-SM-2XCEE 27.5
GTEX-P44H-0326-SM-2XCES 27.5
GTEX-148VI-1726-SM-5S2W9 27.3
GTEX-ZYW4-0226-SM-5E44M 27.2
GTEX-1211K-2226-SM-5FQU6 26.8
GTEX-ZEX8-2326-SM-5S2MN 26.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 16.6
Samples: 227

Max RPKM: 24.2
Min RPKM: 7.9
Std RPKM: 2.5
Median RPKM: 16.7
GTEX-12WSG-0426-SM-5FQSE 24.2
GTEX-WFJO-1026-SM-3GIKL 22.9
GTEX-13N11-1826-SM-5IJDS 22.8
GTEX-ZT9X-0926-SM-5O9C4 22.8
GTEX-ZAJG-1626-SM-5HL7I 21.6
GTEX-11NV4-1426-SM-5BC4W 21.5
GTEX-145ME-0726-SM-5O9A3 21.4
GTEX-11P7K-0826-SM-5BC5F 21.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

55.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 55.6
FF:10010-101C1 65,65,76 years, mixed 55.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.