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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.8TPM
GTEx:20.5RPKM
FANTOM5:75.9Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Low
 

Antibody staining

Antibody HPA019661

 

Antibody HPA019663

 

Antibody HPA024336

 

Cells in red pulp

Medium   Low   Low  

Cells in white pulp

Low   Not detected   Medium  
     
     
     

SPLEEN - HPA RNA-seq

Average TPM

31.8

overview Female, age 60
Sample 1
TPM: 32.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 24.6
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 26.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 30.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 44.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

20.5

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 20.5
Samples: 104

Max RPKM: 31.6
Min RPKM: 12.3
Std RPKM: 4.4
Median RPKM: 19.8
GTEX-12WSG-0926-SM-5EGIH 31.6
GTEX-139T6-0226-SM-5IFGZ 31.6
GTEX-ZPU1-1026-SM-4YCEQ 30.9
GTEX-1211K-0426-SM-5FQTP 30.2
GTEX-131XG-0426-SM-5IFGD 29.0
GTEX-11P7K-0426-SM-5BC5H 28.9
GTEX-1122O-0526-SM-5N9DM 28.4
GTEX-ZP4G-0326-SM-4YCEF 28.4
GTEX-11EQ9-0426-SM-5A5JY 27.5
GTEX-13VXT-1326-SM-5LU3Y 27.2
GTEX-Y114-0726-SM-4TT6U 27.2
GTEX-12WSK-0126-SM-5GCO7 26.8
GTEX-13FH7-1326-SM-5IFG8 26.4
GTEX-13PVR-0326-SM-5RQJY 26.2
GTEX-131XE-1126-SM-5EGHW 25.4
GTEX-Z9EW-0726-SM-5HL9H 25.4
GTEX-12BJ1-0726-SM-5EGGF 25.2
GTEX-ZLWG-0426-SM-4WWFA 25.2
GTEX-146FR-1926-SM-5NQA6 24.7
GTEX-X3Y1-0126-SM-4PQZA 24.6
GTEX-XUJ4-0226-SM-4BOP8 24.5
GTEX-117YX-2126-SM-5GIEL 24.3
GTEX-11DXX-0726-SM-5H12X 24.2
GTEX-13PL7-1126-SM-5MR5O 23.8
GTEX-P4PP-0926-SM-48TBZ 23.7
GTEX-ZVP2-0526-SM-51MSC 23.6
GTEX-XAJ8-0126-SM-47JYG 23.4
GTEX-13111-0126-SM-5EGHO 23.3
GTEX-XPVG-0626-SM-4B65B 23.3
GTEX-147F3-0126-SM-5NQBJ 23.1
GTEX-R55G-0226-SM-48FEI 23.1
GTEX-WHWD-0126-SM-4OORS 22.9
GTEX-XGQ4-0126-SM-4AT4H 22.6
GTEX-PLZ6-0126-SM-48TC6 22.3
GTEX-13CF3-0226-SM-5J1NW 22.2
GTEX-11LCK-0126-SM-5A5M5 21.8
GTEX-XXEK-0126-SM-4BRVU 21.5
GTEX-YFCO-0926-SM-5LUA5 21.4
GTEX-11VI4-0126-SM-5GU6Z 21.2
GTEX-VJYA-0126-SM-4KL1P 21.1
GTEX-YB5E-0426-SM-5IFHR 21.1
GTEX-ZVZP-0726-SM-59HKA 21.0
GTEX-W5WG-0626-SM-4SOID 20.8
GTEX-132QS-0226-SM-5IFFZ 20.7
GTEX-OOBJ-0926-SM-48TDO 20.6
GTEX-YB5K-1926-SM-4VDT4 20.5
GTEX-XMK1-0126-SM-4B65F 20.4
GTEX-P4QS-0926-SM-48TBS 20.3
GTEX-Q2AH-0226-SM-48U1I 20.3
GTEX-Y5LM-0326-SM-4VBRN 20.2
GTEX-11XUK-0426-SM-5EQML 19.9
GTEX-Y8LW-0126-SM-4VBS1 19.9
GTEX-1399S-0226-SM-5IFFG 19.8
GTEX-14E6E-1226-SM-5S2R5 19.8
GTEX-ZLFU-0526-SM-4WWBN 19.7
GTEX-X4LF-0226-SM-4QAS8 19.6
GTEX-X585-1826-SM-4QAS3 19.6
GTEX-UJHI-0126-SM-4IHLP 19.3
GTEX-145MN-0126-SM-5RQHY 19.1
GTEX-S3XE-0626-SM-4AD6B 18.9
GTEX-QDVN-0526-SM-48TZ4 18.5
GTEX-QMRM-0226-SM-4R1K7 18.5
GTEX-ZAB5-0526-SM-5CVMU 18.5
GTEX-QV31-0126-SM-447BP 18.4
GTEX-WFON-0126-SM-4LVM9 18.4
GTEX-ZYFG-0726-SM-5GIDX 18.3
GTEX-144GN-2126-SM-5O99D 18.2
GTEX-ZV6S-0826-SM-5NQ6Z 18.2
GTEX-ZDTT-1026-SM-5KM19 18.0
GTEX-ZYWO-0226-SM-5GZX3 18.0
GTEX-12WSN-0126-SM-5DUX5 17.9
GTEX-QLQW-0126-SM-447BK 17.9
GTEX-14DAR-0326-SM-5S2PS 17.7
GTEX-S4Z8-0226-SM-4AD5K 17.6
GTEX-12WSJ-0526-SM-5GCOZ 17.4
GTEX-1399R-0226-SM-5IJGG 17.4
GTEX-11P81-1326-SM-5GU5S 17.2
GTEX-XV7Q-0126-SM-4BRVK 17.2
GTEX-ZZPU-0126-SM-5E446 17.2
GTEX-139YR-0426-SM-5IFFV 17.1
GTEX-13U4I-1626-SM-5IFFR 17.1
GTEX-T5JW-0126-SM-4DM6K 17.0
GTEX-XQ8I-1726-SM-4BOQB 17.0
GTEX-OIZH-0926-SM-48TBR 16.8
GTEX-Y3I4-0126-SM-4TT26 16.8
GTEX-PW2O-0126-SM-48TC8 16.7
GTEX-U4B1-0526-SM-4DXTK 16.5
GTEX-11NSD-0426-SM-5N9CR 16.2
GTEX-O5YT-0926-SM-48TDG 15.7
GTEX-13S86-0126-SM-5S2PI 15.6
GTEX-PX3G-0926-SM-48U12 15.6
GTEX-13X6H-0726-SM-5Q5BX 15.4
GTEX-UPK5-1626-SM-4JBHI 15.4
GTEX-POMQ-0126-SM-48TD6 15.1
GTEX-QV44-0126-SM-4R1KH 15.0
GTEX-U3ZN-0126-SM-4DXUM 14.2
GTEX-YEC4-0126-SM-4W21T 14.2
GTEX-13N11-0126-SM-5KM2Z 14.1
GTEX-146FQ-0626-SM-5LU9U 13.9
GTEX-Q734-0226-SM-48U1A 13.9
GTEX-U3ZH-0126-SM-4DXUK 13.9
GTEX-RUSQ-0126-SM-47JWV 13.1
GTEX-Y3IK-0126-SM-4WWE9 12.8
GTEX-QCQG-0226-SM-48U28 12.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

75.9

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 75.9
FF:10025-101D7 39,50,70 years, male 75.9

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