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FOXN3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.9TPM
GTEx:13.3RPKM
FANTOM5:99.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA059209

  

Endothelial cells

 High  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

24.9
overview Male, age 54
Sample 1
TPM: 22.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 26.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 20.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 27.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 26.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 28.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 22.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 22.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 27.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 19.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 26.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 32.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 20.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.3

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 16.7
Samples: 149

Max RPKM: 26.8
Min RPKM: 7.9
Std RPKM: 3.6
Median RPKM: 16.5
GTEX-ZXES-1726-SM-5E43G 26.8
GTEX-ZDTS-2726-SM-5L3E2 26.1
GTEX-12WSG-2426-SM-5EQLZ 24.8
GTEX-12BJ1-2026-SM-5FQUH 24.5
GTEX-ZF28-2526-SM-57WFH 24.0
GTEX-ZYT6-2826-SM-5GICX 23.8
GTEX-13OVI-2126-SM-5KM3U 23.7
GTEX-13PVR-1726-SM-5Q5EC 23.3
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 10.8
Samples: 196

Max RPKM: 28.7
Min RPKM: 3.1
Std RPKM: 5.2
Median RPKM: 9
GTEX-ZV6S-1226-SM-59HLH 28.7
GTEX-14AS3-1126-SM-5Q5CR 27.2
GTEX-Z93S-2426-SM-5HL8N 24.6
GTEX-11TTK-2426-SM-5PNYO 23.1
GTEX-S341-1426-SM-4AD6U 22.9
GTEX-145LS-2726-SM-5Q5D8 22.3
GTEX-12WSL-1626-SM-5GCMU 21.8
GTEX-13CF3-1426-SM-5K7YY 21.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

99.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 99.9
FF:10014-101C5 62,83,84 years, mixed 99.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.