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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:44.5RPKM
FANTOM5:126.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA045119

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

44.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 44.5
Samples: 117

Max RPKM: 82.6
Min RPKM: 20.3
Std RPKM: 10.7
Median RPKM: 44.3
GTEX-12WSA-0011-R5b-SM-5GU5I 82.6
GTEX-T2IS-0011-R5A-SM-32QP4 82.4
GTEX-139TT-0011-R5b-SM-5K7W8 78.0
GTEX-PVOW-0011-R5A-SM-32PL7 66.0
GTEX-P44H-0011-R5A-SM-2XCEX 63.8
GTEX-WVLH-0011-R5A-SM-3MJFW 63.8
GTEX-WWYW-0011-R5A-SM-3NB3E 62.4
GTEX-12WSB-0011-R5b-SM-5GU67 59.9
GTEX-12WSF-0011-R5a-SM-5HL8K 59.4
GTEX-1399T-0011-R5b-SM-5IJDK 58.7
GTEX-ZUA1-0011-R5b-SM-51MTG 55.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 55.4
GTEX-WL46-0011-R5A-SM-3LK6V 54.2
GTEX-13O3O-0011-R5b-SM-5KM44 54.0
GTEX-T6MN-0011-R5A-SM-32QPD 53.8
GTEX-13NYB-0011-R5a-SM-5MR45 53.4
GTEX-13FLV-0011-R5a-SM-5LZWT 53.1
GTEX-WZTO-0011-R5B-SM-3NMC5 52.8
GTEX-1313W-0011-R5b-SM-5L3EP 52.7
GTEX-14ABY-0011-R5b-SM-5SI7B 52.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 52.1
GTEX-11NV4-0011-R5a-SM-5NQ88 52.0
GTEX-13X6K-0011-R5b-SM-5PNUE 52.0
GTEX-X4XX-0011-R5A-SM-46MWN 52.0
GTEX-T5JC-0011-R5A-SM-32PLK 51.5
GTEX-145MH-0011-R5a-SM-5P9JT 51.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 50.7
GTEX-X585-0011-R5A-SM-46MVI 50.7
GTEX-QMR6-0011-R5A-SM-32PKT 50.6
GTEX-YFC4-0011-R5a-SM-4RGLR 50.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 49.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 49.8
GTEX-11OF3-0011-R5a-SM-57WB4 49.7
GTEX-Z93S-0011-R5b-SM-4RGNI 49.6
GTEX-11H98-0011-R5b-SM-57WCF 49.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 49.4
GTEX-N7MS-0011-R5a-SM-2HMK8 49.3
GTEX-11WQC-0011-R5a-SM-5BC74 49.1
GTEX-131YS-0011-R5b-SM-5K7YB 49.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 47.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 47.7
GTEX-13X6J-0011-R5b-SM-5PNWT 47.5
GTEX-13FXS-0011-R5b-SM-5LZYE 47.3
GTEX-R55E-0011-R5A-SM-2TC5N 47.3
GTEX-XOTO-0011-R5A-SM-4B657 47.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 46.9
GTEX-13JVG-0011-R5a-SM-5MR4O 46.4
GTEX-13G51-0011-R5a-SM-5L3EB 46.3
GTEX-ZE7O-0011-R5a-SM-57WBO 46.2
GTEX-13SLX-0011-R5a-SM-5O9BV 45.5
GTEX-13FLW-0011-R5a-SM-5LZX6 45.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 45.3
GTEX-13OW7-0011-R5b-SM-5O9DM 45.2
GTEX-QVJO-0011-R5A-SM-2S1QM 45.2
GTEX-145LS-0011-R5a-SM-5SI65 44.8
GTEX-TSE9-0011-R5A-SM-3DB7J 44.6
GTEX-S7SE-0011-R5A-SM-2XCDA 44.4
GTEX-11GSP-0011-R5a-SM-57WBE 44.3
GTEX-14BIM-0011-R5b-SM-5S2RM 44.2
GTEX-13X6I-0011-R5a-SM-5PNWW 43.8
GTEX-N7MT-0011-R5a-SM-2I3G6 43.3
GTEX-132Q8-0011-R5a-SM-5IJDM 42.5
GTEX-139TS-0011-R5b-SM-5J2MZ 42.4
GTEX-12WSD-0011-R5b-SM-5CVNG 42.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 42.3
GTEX-13CZV-0011-R5a-SM-5K7XA 42.1
GTEX-13OVL-0011-R5b-SM-5L3FU 41.7
GTEX-13OW6-0011-R5a-SM-5O9BK 41.7
GTEX-12ZZX-0011-R5a-SM-5HL89 41.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 41.1
GTEX-13VXU-0011-R5a-SM-5O9D7 41.0
GTEX-RU72-0011-R5A-SM-2TF6U 41.0
GTEX-13OVH-0011-R5b-SM-5KM4L 40.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 40.5
GTEX-ZXG5-0011-R5b-SM-57WBN 39.9
GTEX-14BIN-0011-R5b-SM-5SI78 39.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 39.2
GTEX-X261-0011-R5A-SM-3NMB4 38.9
GTEX-RVPU-0011-R5A-SM-2XCAD 38.7
GTEX-UTHO-0011-R5A-SM-3GIJD 38.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 38.4
GTEX-13NYS-0011-R5a-SM-5MR4D 38.3
GTEX-144GO-0011-R5a-SM-5PNUR 38.3
GTEX-144GL-0011-R5b-SM-5PNUJ 38.2
GTEX-ZVT3-0011-R5a-SM-51MSI 38.1
GTEX-NPJ7-0011-R5a-SM-33HBK 37.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 37.8
GTEX-XMD1-0011-R5A-SM-4AT47 37.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 37.2
GTEX-13OW5-0011-R5b-SM-5L3FR 37.0
GTEX-1445S-0011-R5a-SM-5PNUS 36.8
GTEX-13CIG-0011-R5b-SM-5L3F2 36.7
GTEX-13JUV-0011-R5a-SM-5LZY5 36.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 35.2
GTEX-ZV68-0011-R5a-SM-4YCDW 34.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 34.2
GTEX-NL3H-0011-R5a-SM-2I3GB 34.0
GTEX-YJ89-0011-R5a-SM-4V6GM 33.8
GTEX-RVPV-0011-R5A-SM-2TF69 32.8
GTEX-13112-0011-R5b-SM-5DUV8 32.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 31.6
GTEX-13S7M-0011-R5b-SM-5P9HS 31.4
GTEX-NL4W-0011-R5a-SM-2I3GD 31.4
GTEX-12WSH-0011-R5b-SM-5P9F3 31.2
GTEX-13FHP-0011-R5b-SM-5LZY2 30.2
GTEX-OHPN-0011-R5A-SM-2I5FF 30.2
GTEX-OXRN-0011-R5A-SM-2I5EF 30.1
GTEX-139T8-0011-R5b-SM-5J1MO 30.0
GTEX-S7PM-0011-R5A-SM-3NM8G 30.0
GTEX-13CF2-0011-R5a-SM-5LZWS 29.2
GTEX-11UD1-0011-R5b-SM-5P9FP 28.7
GTEX-145MG-0011-R5b-SM-5S2VU 28.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 26.0
GTEX-1477Z-0011-R5b-SM-5PNUO 21.9
GTEX-13NZA-0011-R5b-SM-5KM4K 20.3
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

126.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 126.5
FF:10379-105H1 89 years, female 132.9
FF:10164-103B2 76 years, female 120.1

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