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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:72.9TPM
GTEx:20.1RPKM
FANTOM5:68.8Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA045119

 

Squamous epithelial cells

Medium  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

72.9

overview Female, age 70
Sample 1
TPM: 88.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 69.4
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 60.9
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

20.1

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 20.1
Samples: 286

Max RPKM: 34.3
Min RPKM: 10
Std RPKM: 3.8
Median RPKM: 19.7
GTEX-13PVR-1826-SM-5Q5CC 34.3
GTEX-11DYG-1326-SM-5N9DO 31.5
GTEX-XLM4-2326-SM-4TT2D 31.2
GTEX-TSE9-1226-SM-4DXTM 31.1
GTEX-13X6K-2126-SM-5O9D4 31.0
GTEX-14ICL-0526-SM-5RQJ6 29.6
GTEX-13OVJ-1226-SM-5L3HA 29.5
GTEX-145MO-1426-SM-5Q5BS 28.1
GTEX-13O3Q-0826-SM-5IFGF 27.8
GTEX-13O1R-1326-SM-5IJF5 27.7
GTEX-XYKS-1526-SM-4BRUP 27.7
GTEX-139UW-1126-SM-5IJEJ 27.6
GTEX-146FQ-1026-SM-5LU8I 27.6
GTEX-ZXES-1126-SM-5GZXN 27.5
GTEX-WEY5-0926-SM-4LMI4 27.1
GTEX-ZA64-0626-SM-5HL9O 27.0
GTEX-144GO-2726-SM-5O9A2 26.8
GTEX-133LE-0626-SM-5IFFJ 26.6
GTEX-R3RS-1326-SM-48FE7 26.5
GTEX-Y111-1626-SM-57WCY 26.5
GTEX-RTLS-1126-SM-46MUQ 26.1
GTEX-ZF3C-1626-SM-4WWB4 26.0
GTEX-T5JC-1726-SM-4DM6U 25.9
GTEX-131XF-0826-SM-5GICG 25.8
GTEX-12WSA-1426-SM-5EGJU 25.6
GTEX-Y114-0926-SM-4TT7J 25.6
GTEX-Y5LM-1026-SM-4VDSQ 25.6
GTEX-1212Z-2126-SM-5FQTM 25.5
GTEX-144FL-2726-SM-5O98Z 25.3
GTEX-YFC4-1226-SM-5LU9R 25.1
GTEX-QEG5-1426-SM-447AS 25.0
GTEX-11ZU8-1526-SM-5EGHX 24.8
GTEX-Y5V6-1026-SM-4VBS2 24.8
GTEX-WFG7-1126-SM-4LMK3 24.7
GTEX-13FHO-1726-SM-5IFGM 24.6
GTEX-S341-0526-SM-4AD5U 24.6
GTEX-ZYY3-1526-SM-5SIA9 24.3
GTEX-11EMC-2226-SM-5A5JW 24.2
GTEX-ZDYS-0826-SM-4WWCR 24.2
GTEX-ZYW4-1326-SM-5E45N 24.2
GTEX-REY6-1326-SM-48FDO 24.0
GTEX-U3ZN-1726-SM-4DXUQ 24.0
GTEX-12KS4-0926-SM-5BC5S 23.9
GTEX-WK11-1026-SM-4OOS8 23.9
GTEX-ZYT6-1126-SM-5GZYR 23.8
GTEX-11LCK-1726-SM-5S2OQ 23.7
GTEX-12696-1326-SM-5FQTJ 23.7
GTEX-TMMY-1126-SM-4DXSX 23.7
GTEX-ZVE2-1326-SM-5NQ94 23.6
GTEX-ZYFG-1126-SM-5GICY 23.6
GTEX-N7MT-0326-SM-48TDP 23.5
GTEX-RU72-0726-SM-46MUW 23.3
GTEX-ZTX8-0226-SM-5E44D 23.3
GTEX-13W3W-1626-SM-5LU35 23.2
GTEX-XUZC-0426-SM-4BOPE 23.2
GTEX-ZZ64-0226-SM-5E44X 23.1
GTEX-Y3IK-1126-SM-51MSV 23.0
GTEX-ZUA1-1226-SM-5NQ6O 23.0
GTEX-145LT-1126-SM-5LUA1 22.9
GTEX-WRHK-0526-SM-4MVOF 22.9
GTEX-ZF29-1326-SM-4WWB6 22.9
GTEX-139TU-1226-SM-5J2NL 22.7
GTEX-13OVI-2626-SM-5KM4T 22.7
GTEX-ZZPT-1426-SM-5N9C5 22.7
GTEX-13PVQ-1726-SM-5IFF3 22.6
GTEX-ZYVF-2226-SM-5GIDD 22.6
GTEX-P4PQ-0626-SM-3NMCU 22.5
GTEX-13X6H-1326-SM-5LU42 22.4
GTEX-T2IS-0826-SM-4DM6L 22.4
GTEX-ZAB4-1126-SM-5HL86 22.4
GTEX-X585-1226-SM-46MW7 22.3
GTEX-14C38-2126-SM-5RQJO 22.2
GTEX-QEG4-0726-SM-4R1JL 22.2
GTEX-11DXY-1426-SM-5N9CN 22.1
GTEX-11VI4-0526-SM-5EQ48 22.1
GTEX-13O21-0626-SM-5IJDI 22.1
GTEX-WOFM-0626-SM-4OOS3 22.0
GTEX-XMK1-1326-SM-4B65Q 22.0
GTEX-YECK-1626-SM-5IFHQ 22.0
GTEX-11EM3-0826-SM-5N9CC 21.9
GTEX-YJ89-1526-SM-5P9IR 21.9
GTEX-11I78-1526-SM-5A5K7 21.8
GTEX-QDVN-1026-SM-48TZA 21.8
GTEX-S7SF-0926-SM-4AD4M 21.8
GTEX-ZY6K-0626-SM-59HJL 21.8
GTEX-145LS-1826-SM-5LUAZ 21.7
GTEX-QVUS-0626-SM-447CC 21.5
GTEX-132Q8-1826-SM-5EGIY 21.4
GTEX-145LV-1326-SM-5S2QI 21.4
GTEX-YF7O-0926-SM-5IFIF 21.4
GTEX-P78B-1026-SM-3NMC4 21.3
GTEX-ZVT2-1326-SM-5E45H 21.3
GTEX-PWCY-0726-SM-48TCS 21.2
GTEX-SNMC-0526-SM-4DM69 21.2
GTEX-P4PP-0626-SM-3NM9X 21.1
GTEX-QESD-0826-SM-47J4G 21.1
GTEX-X4EO-1226-SM-4QARR 21.1
GTEX-146FR-0426-SM-5SI97 21.0
GTEX-1497J-2726-SM-5SI9W 21.0
GTEX-14DAQ-1426-SM-5RQJD 21.0
GTEX-12ZZX-1326-SM-5DUWI 20.9
GTEX-T5JW-1326-SM-4DM5G 20.9
GTEX-U4B1-0826-SM-4DXTW 20.9
GTEX-WVLH-1426-SM-4MVNX 20.9
GTEX-Y8E4-1726-SM-5LU9G 20.9
GTEX-Y8LW-0726-SM-5IFI1 20.9
GTEX-13FH7-0526-SM-5IJF8 20.8
GTEX-144GN-0626-SM-5O9B2 20.8
GTEX-145MN-1026-SM-5NQ9G 20.8
GTEX-PSDG-1326-SM-48TD2 20.7
GTEX-13111-0826-SM-5LZV3 20.6
GTEX-132QS-1426-SM-5P9GE 20.6
GTEX-ZPU1-1426-SM-4WWFU 20.6
GTEX-OXRL-0626-SM-3NM9C 20.5
GTEX-VJYA-0726-SM-4KL1T 20.5
GTEX-XQ8I-1526-SM-4BOOH 20.5
GTEX-Y5V5-1626-SM-4VDSG 20.5
GTEX-13U4I-1126-SM-5LU3S 20.4
GTEX-RNOR-1226-SM-48FDQ 20.4
GTEX-RU1J-0326-SM-46MUM 20.4
GTEX-YB5E-0926-SM-4WWDQ 20.4
GTEX-ZGAY-1126-SM-4WWBS 20.4
GTEX-NFK9-1126-SM-3LK78 20.3
GTEX-R45C-1226-SM-48FEE 20.3
GTEX-ZTPG-1626-SM-5DUX2 20.3
GTEX-11TUW-1326-SM-5EQKV 20.2
GTEX-RWS6-0826-SM-47JXF 20.2
GTEX-UJMC-0926-SM-4IHLK 20.2
GTEX-QCQG-0626-SM-48U21 20.1
GTEX-ZTSS-0626-SM-59867 20.1
GTEX-111YS-0926-SM-5EGGI 20.0
GTEX-13CF3-1626-SM-5IFG9 20.0
GTEX-OXRP-0926-SM-48TC1 20.0
GTEX-PWN1-0626-SM-48TDT 20.0
GTEX-YEC3-2526-SM-4YCDN 20.0
GTEX-11NSD-1126-SM-5N9BQ 19.9
GTEX-R55E-1326-SM-48FCR 19.9
GTEX-U3ZM-0526-SM-4DXTB 19.9
GTEX-X4LF-0626-SM-4QASB 19.9
GTEX-139T6-0626-SM-5IFF9 19.8
GTEX-Q2AH-0826-SM-48TZN 19.8
GTEX-RM2N-0726-SM-48FD5 19.8
GTEX-S95S-0426-SM-4B64I 19.8
GTEX-V955-1126-SM-4JBH3 19.7
GTEX-WQUQ-1626-SM-4OOSH 19.7
GTEX-11NUK-1326-SM-5P9GN 19.6
GTEX-13G51-0926-SM-5IFFU 19.6
GTEX-13NZB-1226-SM-5J2MW 19.6
GTEX-XGQ4-1526-SM-4AT6H 19.6
GTEX-XK95-1026-SM-4GIDV 19.6
GTEX-11P7K-1326-SM-5BC5G 19.5
GTEX-11XUK-0826-SM-5GU6P 19.5
GTEX-T8EM-0526-SM-4DM64 19.5
GTEX-TKQ1-0326-SM-4DXSM 19.5
GTEX-12ZZW-1726-SM-5DUVD 19.4
GTEX-145MF-1426-SM-5O9B6 19.4
GTEX-OOBK-0625-SM-3LK5P 19.4
GTEX-W5WG-1626-SM-4LMKG 19.4
GTEX-131XG-1026-SM-5GCMX 19.3
GTEX-Y9LG-0626-SM-4WWDH 19.3
GTEX-1399U-1026-SM-5J1OC 19.2
GTEX-13QBU-1026-SM-5LU3R 19.2
GTEX-OIZI-1426-SM-3NB1T 19.2
GTEX-OXRN-1726-SM-3NM9B 19.2
GTEX-11GSP-1826-SM-5N9DQ 19.1
GTEX-11P82-0526-SM-5986P 19.1
GTEX-12WSD-1826-SM-5GCOA 19.1
GTEX-13FLV-1126-SM-5J2NO 19.1
GTEX-P4QS-0626-SM-3NMD1 19.1
GTEX-XBEW-1326-SM-4AT63 19.1
GTEX-XOTO-2126-SM-4B64U 19.1
GTEX-11DZ1-2026-SM-5A5KG 19.0
GTEX-12C56-1226-SM-5FQSU 19.0
GTEX-12WSK-1126-SM-5LZV8 19.0
GTEX-147F3-0826-SM-5NQA7 18.9
GTEX-S32W-0926-SM-4AD5X 18.9
GTEX-XMD2-1326-SM-4YCET 18.9
GTEX-T6MO-0526-SM-4DM6R 18.8
GTEX-U3ZH-1026-SM-4DXUZ 18.8
GTEX-Y3I4-1226-SM-4TT8N 18.8
GTEX-UJHI-0826-SM-4IHLM 18.7
GTEX-QV44-1126-SM-4R1KO 18.6
GTEX-UPK5-1226-SM-4IHL8 18.6
GTEX-ZE9C-1126-SM-4WWBD 18.6
GTEX-ZF2S-1226-SM-4WWAX 18.6
GTEX-14E6E-0726-SM-5S2R3 18.5
GTEX-WFG8-1226-SM-4V6EI 18.4
GTEX-WH7G-0926-SM-4LVMJ 18.4
GTEX-X3Y1-1326-SM-4PQZB 18.4
GTEX-ZVP2-1326-SM-57WCE 18.4
GTEX-11DXX-1126-SM-5GZZK 18.3
GTEX-13FTX-0526-SM-5IFGS 18.3
GTEX-13OW8-2326-SM-5L3I9 18.3
GTEX-OXRK-1326-SM-3NB1A 18.3
GTEX-QEL4-1426-SM-447AC 18.3
GTEX-QLQW-0526-SM-4R1KS 18.3
GTEX-WFON-0826-SM-4LVMI 18.3
GTEX-U8XE-1726-SM-4E3IF 18.2
GTEX-UPIC-1026-SM-4IHLT 18.2
GTEX-V1D1-1026-SM-4JBHE 18.2
GTEX-144GM-1426-SM-5LU31 18.0
GTEX-12WSL-1526-SM-5GCP8 17.9
GTEX-RN64-1026-SM-48FDX 17.9
GTEX-R55G-1026-SM-48FDI 17.8
GTEX-S33H-0826-SM-4AD5Y 17.8
GTEX-111CU-0726-SM-5GZYD 17.7
GTEX-117YX-1626-SM-5GZZG 17.7
GTEX-12BJ1-1626-SM-5HL8Y 17.7
GTEX-PLZ6-0526-SM-3P61C 17.7
GTEX-R55C-0826-SM-48FCL 17.7
GTEX-X15G-0826-SM-4PQZD 17.7
GTEX-PVOW-1626-SM-48TC9 17.6
GTEX-QLQ7-0926-SM-447BC 17.6
GTEX-Z9EW-0526-SM-5HL8S 17.6
GTEX-ZQUD-0426-SM-57WFR 17.6
GTEX-1122O-1726-SM-5GICM 17.5
GTEX-S4Q7-0626-SM-4AD5M 17.5
GTEX-XV7Q-1126-SM-4BRVS 17.3
GTEX-ZAB5-0926-SM-5CVMV 17.3
GTEX-ZLV1-0526-SM-4WWD4 17.3
GTEX-ZPCL-1426-SM-57WEC 17.3
GTEX-13X6I-1026-SM-5LU4C 17.2
GTEX-14E1K-1226-SM-5S2PD 17.1
GTEX-11ZTS-2626-SM-5EGIC 17.0
GTEX-131YS-1426-SM-5IJF7 17.0
GTEX-OIZH-0626-SM-3NB1L 17.0
GTEX-TML8-1526-SM-4DXUX 17.0
GTEX-146FH-1726-SM-5QGQ2 16.9
GTEX-14BIN-2726-SM-5RQIE 16.8
GTEX-14H4A-1626-SM-5SI69 16.8
GTEX-P4QT-0626-SM-3NMCP 16.8
GTEX-SNOS-0626-SM-4DM5F 16.8
GTEX-ZT9W-1326-SM-51MTB 16.8
GTEX-1211K-0926-SM-5FQTL 16.7
GTEX-ZG7Y-1126-SM-4WWEZ 16.7
GTEX-X4XY-1726-SM-46MVO 16.6
GTEX-1399Q-1126-SM-5P9JA 16.5
GTEX-13RTK-0526-SM-5S2QF 16.5
GTEX-XUJ4-1026-SM-4BOPB 16.4
GTEX-11DXZ-1226-SM-5H11L 16.3
GTEX-11ONC-1526-SM-5GU6S 16.3
GTEX-145ME-0526-SM-5QGQV 16.3
GTEX-S4P3-0426-SM-4AD56 16.3
GTEX-148VJ-1026-SM-5LU98 16.2
GTEX-1399S-1326-SM-5P9GH 16.1
GTEX-13OVG-0626-SM-5IFEP 16.1
GTEX-13QJ3-1726-SM-5RQK9 16.1
GTEX-12ZZY-1426-SM-5N9EI 16.0
GTEX-S3XE-0926-SM-4AD4S 16.0
GTEX-WFJO-0826-SM-4LVM5 16.0
GTEX-XBED-1026-SM-48TCB 16.0
GTEX-SE5C-1226-SM-4BRWV 15.7
GTEX-ZT9X-0526-SM-5GCOP 15.6
GTEX-XQ3S-1126-SM-4BOPK 15.5
GTEX-ZYWO-1026-SM-5E45U 15.4
GTEX-131XE-1426-SM-5HL7V 15.3
GTEX-13FTW-1626-SM-5KM4N 15.3
GTEX-Q2AI-0626-SM-48TZU 15.3
GTEX-XXEK-0326-SM-4BRVV 15.3
GTEX-11P81-0826-SM-5P9GR 15.2
GTEX-13D11-1926-SM-5IFGB 15.2
GTEX-SUCS-0726-SM-4DM7J 15.1
GTEX-14A6H-1326-SM-5NQBC 15.0
GTEX-QDVJ-0726-SM-48U1W 15.0
GTEX-13W46-1926-SM-5J2MF 14.9
GTEX-14BMU-0926-SM-5S2QB 14.9
GTEX-O5YV-1026-SM-3LK72 14.7
GTEX-NPJ8-1926-SM-3MJGB 14.6
GTEX-R53T-1126-SM-48FD4 14.6
GTEX-R55D-1126-SM-48FEB 14.5
GTEX-11TT1-0526-SM-5P9JO 14.4
GTEX-139YR-1726-SM-5IFFK 14.1
GTEX-PLZ4-1626-SM-3P618 13.9
GTEX-X62O-2226-SM-46MW3 13.9
GTEX-117YW-1926-SM-5H121 13.6
GTEX-11EQ9-0726-SM-5A5K2 13.6
GTEX-1399R-0826-SM-5IJEL 13.6
GTEX-VUSG-1226-SM-4KKZF 13.5
GTEX-RVPV-0526-SM-47JYL 13.3
GTEX-OIZG-1026-SM-3LK5X 13.2
GTEX-ZC5H-1326-SM-5HL7E 13.1
GTEX-PLZ5-0926-SM-3TW8L 12.8
GTEX-14AS3-0626-SM-5QGQD 12.0
GTEX-13S86-0826-SM-5SI6J 11.9
GTEX-RUSQ-0826-SM-47JWW 11.8
GTEX-132AR-2226-SM-5J2NT 10.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

68.8

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 68.8
FF:10015-101C6 68,74,75 years, mixed 68.8

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