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GUCY1B3

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.7TPM
GTEx:8.7RPKM
FANTOM5:22.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Chondrocytes:Not available
 

Antibody staining

Antibody HPA020870

  

Antibody CAB010890

  

Adipocytes

 Low   High  

Fibroblasts

 Low   Medium  

Chondrocytes

 High  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA020870

  

Antibody CAB010890

  

Adipocytes

 Low   Medium  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

15.7
N/A Female, age 80
Sample 1
TPM: 22.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 11.5
N/A Female, age 57
Sample 3
TPM: 10.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 23.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 10.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

8.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 8.9
Samples: 350

Max RPKM: 24.4
Min RPKM: 1.8
Std RPKM: 4.4
Median RPKM: 7.9
GTEX-145MF-0526-SM-5LUA6 24.4
GTEX-11EI6-0226-SM-5EQ64 24.0
GTEX-11OF3-2426-SM-5Q5AS 22.4
GTEX-13QJ3-0426-SM-5RQHP 22.2
GTEX-13OVL-0326-SM-5IJCS 22.0
GTEX-13NZ9-0526-SM-5J1OX 21.4
GTEX-11WQC-2426-SM-5EQKQ 21.1
GTEX-111FC-0226-SM-5N9B8 20.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 8.4
Samples: 227

Max RPKM: 24.3
Min RPKM: 1.3
Std RPKM: 4.2
Median RPKM: 8
GTEX-UPK5-1826-SM-3GAEB 24.3
GTEX-11NV4-1426-SM-5BC4W 20.8
GTEX-13JUV-0626-SM-5J1MQ 20.3
GTEX-13OW7-1126-SM-5K7V6 20.1
GTEX-X585-2526-SM-4QAS1 20.0
GTEX-11ZUS-1826-SM-5FQTR 18.8
GTEX-ZE7O-1526-SM-5J1NH 18.6
GTEX-13NZB-0826-SM-5K7X5 17.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

22.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 22.4
FF:10010-101C1 65,65,76 years, mixed 22.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.