Fields »
ABOUT
HELP
BLOG
GUCY1B3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.9TPM
GTEx:14.1RPKM
FANTOM5:39.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA020870

  

Antibody CAB010890

  

Endothelial cells

 Medium   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

8.9
overview Male, age 54
Sample 1
TPM: 7.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 3.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 10.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 9.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 21.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 6.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 3.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 14.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 4.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 9.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 14.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 8.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.1

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 20.2
Samples: 149

Max RPKM: 53
Min RPKM: 6.2
Std RPKM: 6.5
Median RPKM: 19.6
GTEX-11WQK-2526-SM-5CVL8 53.0
GTEX-XV7Q-2226-SM-4BRVY 41.0
GTEX-131XG-1526-SM-5GCNQ 40.5
GTEX-132AR-2826-SM-5IJFV 38.0
GTEX-13D11-0626-SM-5LZYY 36.2
GTEX-12WSG-2426-SM-5EQLZ 34.7
GTEX-13CF3-1326-SM-5LZXZ 31.7
GTEX-13FHO-2726-SM-5K7VG 31.1
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 9.4
Samples: 196

Max RPKM: 33.4
Min RPKM: 0.4
Std RPKM: 8.5
Median RPKM: 6.5
GTEX-11WQK-2126-SM-5EQME 33.4
GTEX-14AS3-1126-SM-5Q5CR 30.8
GTEX-V955-1626-SM-4JBHJ 30.6
GTEX-XXEK-1926-SM-4BRVD 30.2
GTEX-117YX-0826-SM-5H11J 28.3
GTEX-145LS-2726-SM-5Q5D8 28.2
GTEX-12WSL-1626-SM-5GCMU 27.5
GTEX-11P81-1126-SM-5GU5G 27.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.3
FF:10014-101C5 62,83,84 years, mixed 39.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.