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Gene name

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External id

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Reliability

Reliability

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Validation

Method

Validation

Method

Validation

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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RNF4
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:35.5TPM
GTEx:11.6RPKM
FANTOM5:48.6Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA049356

 

Glandular cells

Low  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

35.5

overview Male, age 62
Sample 1
TPM: 24.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 33.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 35.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 36.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 39.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 40.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 38.3
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 36.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 41.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 11.6
Samples: 106

Max RPKM: 21
Min RPKM: 8.1
Std RPKM: 1.8
Median RPKM: 11.4
GTEX-11WQK-2726-SM-5EQMU 21.0
GTEX-YJ8A-1126-SM-5IFJU 17.5
GTEX-U8XE-2526-SM-4E3IT 16.6
GTEX-QLQ7-1326-SM-4R1JY 15.8
GTEX-11O72-2726-SM-5HL6K 15.2
GTEX-148VJ-1826-SM-5Q5DV 15.2
GTEX-RM2N-1126-SM-48FCY 15.1
GTEX-WFG8-1826-SM-4LVM4 14.6
GTEX-RWSA-2026-SM-47JX8 14.3
GTEX-111CU-1526-SM-5N9FS 13.5
GTEX-13FHO-2826-SM-5K7ZA 13.5
GTEX-11TUW-2126-SM-5GU7B 13.3
GTEX-12696-2226-SM-5EQ65 13.0
GTEX-14ABY-0726-SM-5Q5DF 12.9
GTEX-ZTTD-2726-SM-57WFA 12.9
GTEX-X5EB-1826-SM-4E3K8 12.8
GTEX-S3XE-1326-SM-4AD4H 12.6
GTEX-U412-2026-SM-4DXSI 12.5
GTEX-ZPU1-2026-SM-57WFI 12.5
GTEX-13O61-1726-SM-5KM46 12.4
GTEX-WH7G-1726-SM-4LVKY 12.3
GTEX-12ZZZ-2026-SM-5LZWJ 12.2
GTEX-14E6E-1126-SM-5S2R4 12.2
GTEX-V955-1826-SM-4JBIL 12.2
GTEX-144GM-0826-SM-5O98R 12.1
GTEX-T8EM-1826-SM-4DM7F 12.1
GTEX-XOTO-2826-SM-4B65I 12.1
GTEX-XPVG-2026-SM-4B65E 12.1
GTEX-YF7O-1926-SM-4W1YQ 12.1
GTEX-111YS-1726-SM-5GIED 12.0
GTEX-REY6-2126-SM-48FD9 12.0
GTEX-ZY6K-1526-SM-5GZXE 12.0
GTEX-13NYS-1026-SM-5KLZT 11.9
GTEX-13OW8-0426-SM-5J2NR 11.9
GTEX-QMRM-1426-SM-4R1K8 11.9
GTEX-145LV-1226-SM-5S2QH 11.8
GTEX-NPJ8-2426-SM-3MJHL 11.8
GTEX-QV31-1026-SM-4R1K3 11.8
GTEX-111FC-2026-SM-5GZYO 11.7
GTEX-12BJ1-1226-SM-5LUAE 11.7
GTEX-131XF-1926-SM-5DUW4 11.7
GTEX-OOBJ-2026-SM-3NB1R 11.7
GTEX-S33H-1826-SM-4AD65 11.7
GTEX-S4Q7-1026-SM-4AD75 11.7
GTEX-U3ZM-0926-SM-4DXSW 11.7
GTEX-139T6-1526-SM-5P9G6 11.6
GTEX-WFG7-1826-SM-3GIL1 11.6
GTEX-11TT1-2026-SM-5EQM8 11.5
GTEX-WZTO-0926-SM-4PQZ3 11.5
GTEX-13FTW-1226-SM-5LZZ1 11.4
GTEX-S95S-1026-SM-4B64M 11.4
GTEX-SNOS-1026-SM-4DM4Y 11.4
GTEX-WFON-1626-SM-4LVMV 11.4
GTEX-WOFM-0326-SM-4OOSL 11.4
GTEX-Y9LG-1826-SM-4VBQC 11.4
GTEX-ZLFU-1726-SM-4WWBU 11.4
GTEX-14BMV-2326-SM-5RQJ4 11.3
GTEX-QEG4-2226-SM-4R1JM 11.3
GTEX-WK11-2626-SM-4OOSK 11.3
GTEX-NFK9-2226-SM-3MJGP 11.2
GTEX-OIZH-2026-SM-3NB1M 11.2
GTEX-XAJ8-0626-SM-47JY4 11.2
GTEX-XMK1-1026-SM-4B65H 11.2
GTEX-146FQ-1726-SM-5QGPX 11.1
GTEX-XGQ4-1826-SM-4AT6F 11.1
GTEX-ZTX8-1026-SM-5EGHD 11.1
GTEX-12C56-1326-SM-5FQSV 11.0
GTEX-13N2G-1826-SM-5KM1I 11.0
GTEX-SJXC-2026-SM-4DM6N 11.0
GTEX-SNMC-0926-SM-4DM5U 11.0
GTEX-117YX-1526-SM-5H12T 10.9
GTEX-11DYG-2526-SM-5N9BB 10.9
GTEX-Q2AI-1126-SM-48U19 10.9
GTEX-QV44-1526-SM-4R1KI 10.9
GTEX-ZZ64-0926-SM-5E44L 10.9
GTEX-11EQ9-1726-SM-5HL6U 10.8
GTEX-132QS-1126-SM-5P9GC 10.8
GTEX-11ZUS-2126-SM-5N9E6 10.7
GTEX-13FXS-2826-SM-5LZYC 10.7
GTEX-145LT-0626-SM-5O99E 10.7
GTEX-VJYA-1226-SM-3GIJ6 10.7
GTEX-11OF3-1726-SM-5GU5Q 10.6
GTEX-1399T-1226-SM-5P9J5 10.6
GTEX-UTHO-2726-SM-4JBH9 10.6
GTEX-1399R-0526-SM-5IJEF 10.5
GTEX-V1D1-1926-SM-4JBGX 10.5
GTEX-ZT9W-1626-SM-4YCDQ 10.5
GTEX-13G51-2326-SM-5LZXV 10.3
GTEX-11NSD-0826-SM-5986S 10.2
GTEX-11P82-1126-SM-5BC5K 10.2
GTEX-Y8E4-2126-SM-5RQHO 10.1
GTEX-OOBK-2025-SM-3LK5S 10.0
GTEX-13O21-1126-SM-5N9EV 9.9
GTEX-U4B1-1426-SM-4DXTX 9.9
GTEX-YB5E-1826-SM-5IFI4 9.9
GTEX-ZDYS-1226-SM-5IJF3 9.9
GTEX-13111-1326-SM-5GCNO 9.6
GTEX-PLZ6-1126-SM-3P5ZR 9.5
GTEX-13RTJ-2126-SM-5S2PZ 9.4
GTEX-11P7K-0626-SM-5985Z 9.3
GTEX-XQ3S-2526-SM-4BOOG 9.3
GTEX-14C5O-2826-SM-5RQI6 9.2
GTEX-ZVP2-0826-SM-59HJ6 9.2
GTEX-ZUA1-2826-SM-59HLE 8.9
GTEX-117YW-1426-SM-5EGGO 8.2
GTEX-132NY-2826-SM-5P9G2 8.1
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

48.6

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 48.6
FF:10022-101D4 73,79,93 years, male 48.6

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