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Gene name

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External id

In atlas

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Reliability

Reliability

Validation

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Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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RNF4
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:56.5TPM
GTEx:16.0RPKM
FANTOM5:107.5Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:Low
Leydig cells:Not detected
 

Antibody staining

Antibody HPA049356

 

Cells in seminiferous ducts

Low  

Leydig cells

Not detected  
 
 

TESTIS - HPA RNA-seq

Average TPM

56.5

overview Male, age 56
Sample 1
TPM: 67.9
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 58.5
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 67.4
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 53.8
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 49.6
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 58.7
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 52.1
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 51.9
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 55.9
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 49.4
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

16.0

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 16.0
Samples: 172

Max RPKM: 23.1
Min RPKM: 9.2
Std RPKM: 2.4
Median RPKM: 15.8
GTEX-RM2N-1326-SM-48FCW 23.1
GTEX-U3ZH-1526-SM-4DXV1 22.8
GTEX-QLQ7-1426-SM-4R1JX 22.4
GTEX-WFON-2026-SM-4LVMW 21.8
GTEX-XBED-2026-SM-4AT5D 21.8
GTEX-XPVG-2226-SM-4B65U 21.6
GTEX-Y8E4-2226-SM-5LU94 20.7
GTEX-ZDTT-2026-SM-5K7TY 20.4
GTEX-RUSQ-2126-SM-47JXK 20.3
GTEX-O5YT-2126-SM-3MJGD 20.2
GTEX-13FTW-1326-SM-5LZZD 20.0
GTEX-XPT6-1626-SM-4B655 19.9
GTEX-Y9LG-1726-SM-4VBQE 19.8
GTEX-R55C-1426-SM-48FED 19.4
GTEX-NFK9-0126-SM-3LK5H 19.3
GTEX-S33H-0126-SM-4AD62 19.3
GTEX-U3ZM-1626-SM-4DXSK 19.3
GTEX-S3XE-1526-SM-4AD5A 18.9
GTEX-13O1R-0726-SM-5IJEI 18.7
GTEX-ZA64-1626-SM-5CVME 18.6
GTEX-11WQK-2826-SM-5EQKH 18.5
GTEX-QLQW-1026-SM-447A9 18.5
GTEX-S7SE-0326-SM-4AT5Q 18.5
GTEX-WOFM-1126-SM-4OOSB 18.5
GTEX-SNMC-1026-SM-4DM7K 18.4
GTEX-Q2AH-1526-SM-48TZG 18.3
GTEX-UPJH-0126-SM-4IHLL 18.3
GTEX-11NSD-1026-SM-5N9BE 18.2
GTEX-SUCS-1326-SM-4DM5T 18.2
GTEX-11TT1-2226-SM-5GU6B 18.1
GTEX-P4QS-2126-SM-3NMCF 18.1
GTEX-PLZ5-1526-SM-3P5ZX 18.1
GTEX-QV44-1726-SM-4R1KG 18.0
GTEX-T8EM-0126-SM-4DM5R 18.0
GTEX-ZUA1-2726-SM-59HLJ 17.9
GTEX-14753-0626-SM-5Q5CY 17.8
GTEX-147JS-0126-SM-5S2TW 17.7
GTEX-QV31-1126-SM-4R1K4 17.7
GTEX-WVLH-2626-SM-4MVNV 17.7
GTEX-YEC4-1526-SM-4W1YU 17.7
GTEX-ZDYS-1326-SM-5IJFF 17.7
GTEX-ZV7C-2026-SM-5NQ8F 17.7
GTEX-13O61-2026-SM-5J2M6 17.6
GTEX-145LT-0426-SM-5LUAP 17.6
GTEX-OIZI-0126-SM-3NB13 17.6
GTEX-OOBJ-2126-SM-3NB1N 17.6
GTEX-YB5E-1926-SM-5IFIG 17.6
GTEX-111CU-1726-SM-5EGHM 17.4
GTEX-Y5V6-1726-SM-4VDSZ 17.4
GTEX-ZPU1-2126-SM-57WED 17.3
GTEX-TKQ1-0926-SM-4DXU2 17.2
GTEX-YFCO-1726-SM-4W21S 17.2
GTEX-RN64-2326-SM-48FDW 17.1
GTEX-132QS-1226-SM-5P9GD 16.9
GTEX-139T6-1226-SM-5IFFC 16.9
GTEX-TKQ2-1526-SM-4DXUN 16.8
GTEX-WFG8-1926-SM-4LVM1 16.8
GTEX-1212Z-0326-SM-5FQSJ 16.7
GTEX-Q2AI-1226-SM-48U14 16.7
GTEX-QMRM-1526-SM-4R1K6 16.7
GTEX-U8T8-1126-SM-4DXUE 16.7
GTEX-ZTSS-1526-SM-51MTC 16.7
GTEX-1399R-1626-SM-5P9GG 16.6
GTEX-U4B1-1526-SM-4DXSL 16.6
GTEX-XMK1-2026-SM-4B65K 16.6
GTEX-13O21-1226-SM-5J2MK 16.5
GTEX-13OW6-0126-SM-5IJGM 16.5
GTEX-144GN-1626-SM-5Q5BU 16.5
GTEX-P4QR-0226-SM-3NMCH 16.5
GTEX-YJ89-0626-SM-4TT3Z 16.5
GTEX-OXRL-2126-SM-3NM98 16.4
GTEX-U8XE-0126-SM-4E3I3 16.4
GTEX-145MH-2326-SM-5O9AW 16.3
GTEX-T5JC-0726-SM-4DM55 16.2
GTEX-1339X-1926-SM-5PNVP 16.1
GTEX-YF7O-2026-SM-4W1YE 16.1
GTEX-11LCK-2326-SM-5HL53 16.0
GTEX-13NZA-2526-SM-5IJFX 16.0
GTEX-RWSA-2426-SM-47JXR 16.0
GTEX-SNOS-1126-SM-4DM67 16.0
GTEX-111YS-2026-SM-5EGGL 15.9
GTEX-13112-0226-SM-5P9IV 15.9
GTEX-OHPM-2126-SM-3LK75 15.9
GTEX-V955-1926-SM-4KL1L 15.9
GTEX-XBEC-0126-SM-4GIDT 15.9
GTEX-13FHP-2826-SM-5IJFW 15.8
GTEX-147F4-0626-SM-5LUAK 15.8
GTEX-ZTX8-1126-SM-51MRM 15.8
GTEX-12ZZY-0126-SM-5LZV2 15.7
GTEX-11EI6-2226-SM-5EGJM 15.6
GTEX-13NYB-2226-SM-5MR58 15.6
GTEX-S95S-1126-SM-4B64E 15.6
GTEX-X3Y1-2626-SM-4PQZI 15.6
GTEX-ZT9W-2226-SM-57WFU 15.6
GTEX-144GL-0726-SM-5LU4P 15.5
GTEX-WZTO-0326-SM-4PQYZ 15.5
GTEX-ZVZP-2226-SM-57WBF 15.5
GTEX-OIZH-2126-SM-3NB1P 15.4
GTEX-R55D-0126-SM-48FEL 15.4
GTEX-11ONC-2226-SM-5HL6D 15.3
GTEX-11P82-1526-SM-5BC5M 15.3
GTEX-144GM-0426-SM-5Q5C8 15.3
GTEX-14ABY-0626-SM-5Q5C9 15.3
GTEX-S4Q7-1226-SM-4AD5I 15.3
GTEX-ZYFC-0126-SM-5GIEH 15.3
GTEX-REY6-0126-SM-48FDT 15.2
GTEX-ZZ64-1126-SM-5GZXY 15.2
GTEX-111VG-1926-SM-5GIDO 15.1
GTEX-11TUW-2226-SM-5EQL9 15.1
GTEX-13NZB-2026-SM-5MR4M 15.1
GTEX-X5EB-2026-SM-4E3KA 15.1
GTEX-XGQ4-2026-SM-4AT6G 15.1
GTEX-XQ3S-2726-SM-4BOP2 15.1
GTEX-11P7K-1026-SM-5HL6Y 15.0
GTEX-WHSB-2126-SM-4M1XF 15.0
GTEX-XLM4-1526-SM-4AT6D 14.9
GTEX-YEC3-1726-SM-5IFIK 14.9
GTEX-11EQ9-1926-SM-5PNVV 14.8
GTEX-ZAB4-0126-SM-5CVMG 14.8
GTEX-1399Q-2826-SM-5IJEZ 14.7
GTEX-13N1W-2626-SM-5IJEP 14.7
GTEX-145MO-0126-SM-5S2QU 14.7
GTEX-14A6H-2326-SM-5Q5B5 14.7
GTEX-Y111-2426-SM-4TT23 14.7
GTEX-12C56-1426-SM-5FQSW 14.6
GTEX-13OVH-0726-SM-5N9BU 14.6
GTEX-VJYA-1426-SM-4KL1Y 14.6
GTEX-11EQ8-1426-SM-5EGJR 14.5
GTEX-OOBK-2126-SM-3LK5T 14.5
GTEX-13N2G-0126-SM-5N9DV 14.3
GTEX-QEG5-0126-SM-4R1JR 14.3
GTEX-WH7G-1926-SM-4LVMM 14.3
GTEX-11GS4-2026-SM-5N9CP 14.2
GTEX-WK11-0326-SM-4OOS6 14.2
GTEX-X261-2326-SM-4PQYU 14.2
GTEX-117XS-2026-SM-5GID1 14.1
GTEX-12696-0226-SM-5EGL3 14.1
GTEX-13VXU-0726-SM-5J2O7 14.0
GTEX-131XE-0426-SM-5IJF4 13.9
GTEX-139TT-2226-SM-5LZWO 13.9
GTEX-N7MS-0126-SM-3TW8O 13.9
GTEX-R55E-0726-SM-48FCZ 13.9
GTEX-ZVTK-0126-SM-57WDG 13.9
GTEX-13111-1526-SM-5EGJX 13.8
GTEX-11O72-0726-SM-5P9GO 13.6
GTEX-PW2O-1426-SM-48TCD 13.6
GTEX-11NUK-2626-SM-5A5MB 13.5
GTEX-V1D1-2126-SM-4JBH4 13.4
GTEX-12WSI-2126-SM-5GCMV 13.3
GTEX-139TS-1726-SM-5IJG5 13.3
GTEX-T6MN-2026-SM-4DM7L 13.3
GTEX-13OVL-0426-SM-5IFG6 13.2
GTEX-11NV4-1726-SM-5N9FC 13.1
GTEX-QEG4-0126-SM-48TZE 13.0
GTEX-ZQUD-2026-SM-51MSM 12.9
GTEX-ZT9X-1426-SM-5DUX1 12.9
GTEX-11OF3-1826-SM-5987N 12.7
GTEX-11DXZ-2126-SM-59881 12.6
GTEX-ZAB5-2426-SM-5CVMW 12.6
GTEX-13OW5-2526-SM-5L3I1 12.5
GTEX-XAJ8-1326-SM-47JYT 12.5
GTEX-117YW-1526-SM-5EGGP 12.4
GTEX-12WSH-0326-SM-5GCNH 12.4
GTEX-S7PM-0626-SM-4AD4Q 12.4
GTEX-111FC-1926-SM-5GZYC 12.1
GTEX-ZYT6-2726-SM-5GICP 12.1
GTEX-12WSL-2326-SM-5DUXQ 12.0
GTEX-12WSM-1326-SM-5GCP9 11.9
GTEX-13FLW-2126-SM-5N9FD 11.8
GTEX-11ZUS-2726-SM-5FQUA 11.1
GTEX-11WQC-2326-SM-5EQKE 11.0
GTEX-Z93S-1726-SM-5HL8G 9.2
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

107.5

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 107.5
FF:10096-102C6 14-64 years, male 136.2
FF:10026-101D8 34,53,86 years, male 78.9

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