Expression of TM7SF3 in cancer - Summary

CANCER ATLAS

Gene description

Transmembrane 7 superfamily member 3

Protein class

Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA041097

GENE INFORMATION
Gene name	TM7SF3
Synonyms
Description	Transmembrane 7 superfamily member 3 (HGNC Symbol)
Entrez gene summary
Chromosome	12
Cytoband	p11.23
Chromosome location (bp)	26973195 - 27014434
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000064115 (version 83.38)
Entrez gene	51768
UniProt	Q9NS93 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9NS93
Antibodypedia	TM7SF3 antibodies

PROTEIN BROWSER

TM7SF3-001	TM7SF3-003	TM7SF3-004	TM7SF3-007	TM7SF3-008	TM7SF3-012	TM7SF3-013	TM7SF3-016	TM7SF3-017	TM7SF3-019	TM7SF3-020	TM7SF3-023

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
TM7SF3-001 ENSP00000342322 ENST00000343028	Q9NS93 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 5TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003674 [molecular_function] GO:0005886 [plasma membrane] GO:0008150 [biological_process] GO:0016021 [integral component of membrane] GO:0070062 [extracellular exosome] Show all	570 aa 64.2 kDa	Yes	5
TM7SF3-003 ENSP00000444632 ENST00000543088	F5H587 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		66 aa 7.3 kDa	No	0
TM7SF3-004 ENSP00000439987 ENST00000545600	F5H4T1 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all		116 aa 12.9 kDa	Yes	0
TM7SF3-007 ENSP00000438848 ENST00000535423	F5H3K5 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		37 aa 4.3 kDa	No	0
TM7SF3-008 ENSP00000445756 ENST00000545344	H0YH23 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 5TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	222 aa 24.7 kDa	No	5
TM7SF3-012 ENSP00000440146 ENST00000545303	H0YFT0 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	144 aa 16.1 kDa	No	2
TM7SF3-013 ENSP00000444362 ENST00000537406	H0YGR1 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	81 aa 9.1 kDa	No	2
TM7SF3-016 ENSP00000441027 ENST00000539741	F5GXE1 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		86 aa 9.9 kDa	No	0
TM7SF3-017 ENSP00000441924 ENST00000543655	F5GWC3 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	136 aa 15.3 kDa	No	2
TM7SF3-019 ENSP00000445156 ENST00000535819	F5GWC3 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] Show all	136 aa 15.3 kDa	No	2
TM7SF3-020 ENSP00000442617 ENST00000543803	F5H7C5 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Ezkurdia et al 2014) Show all		129 aa 14.4 kDa	Yes	0
TM7SF3-023 ENSP00000440262 ENST00000512808	F5GY59 [Direct mapping] Transmembrane 7 superfamily member 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		115 aa 12.9 kDa	No	0