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PKM

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:179.8TPM
GTEx:91.2RPKM
FANTOM5:314.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:High
Fibroblasts:Low
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA029501

  

Antibody CAB019421

  

Adipocytes

 Medium   Not detected  

Chondrocytes

 High   High  

Fibroblasts

 Low   Not detected  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA029501

  

Antibody CAB019421

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

179.8
N/A Female, age 80
Sample 1
TPM: 113.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 100.9
N/A Female, age 57
Sample 3
TPM: 97.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 372.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 215.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

91.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 95.8
Samples: 350

Max RPKM: 479.3
Min RPKM: 26.8
Std RPKM: 43.5
Median RPKM: 87.7
GTEX-ZYVF-0226-SM-5GIEG 479.3
GTEX-145MI-0426-SM-5O99V 274.9
GTEX-X4XY-0326-SM-46MVZ 253.4
GTEX-Q734-1826-SM-2I3EL 231.3
GTEX-POMQ-2326-SM-5S2VS 223.2
GTEX-13PLJ-0126-SM-5L3HU 208.7
GTEX-R55F-1426-SM-2TF53 208.5
GTEX-XMD2-0226-SM-4WWEE 203.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 84.0
Samples: 227

Max RPKM: 463.6
Min RPKM: 26.9
Std RPKM: 47.6
Median RPKM: 71.3
GTEX-13X6H-1726-SM-5Q5EH 463.6
GTEX-1128S-0926-SM-5GZZU 318.2
GTEX-13OVH-1126-SM-5K7YP 283.5
GTEX-ZYVF-1026-SM-5E44V 257.8
GTEX-ZZPU-0326-SM-5N9BJ 256.9
GTEX-U8XE-1926-SM-3DB98 221.9
GTEX-X8HC-2326-SM-4QAS4 210.7
GTEX-133LE-0926-SM-5P9J1 183.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

314.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 314.4
FF:10010-101C1 65,65,76 years, mixed 314.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.