We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PKM
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:223.4TPM
GTEx:103.4RPKM
FANTOM5:458.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Adipocytes

Not detected   Not detected  

Glandular cells

Medium   Low  

Myoepithelial cells

Medium   Low  
   
   
   

BREAST - HPA RNA-seq

Average TPM

223.4

overview Female, age 52
Sample 1
TPM: 205.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 258.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 270.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 158.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

103.4

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 103.4
Samples: 214

Max RPKM: 324.8
Min RPKM: 28.7
Std RPKM: 43.5
Median RPKM: 99.1
GTEX-11TT1-2126-SM-5GU5Y 324.8
GTEX-13NZ9-1026-SM-5MR5K 274.0
GTEX-T5JC-2126-SM-32PMO 248.3
GTEX-14ABY-2126-SM-5QGQZ 211.5
GTEX-U8XE-0826-SM-4E3J1 206.8
GTEX-TKQ1-0226-SM-33HB5 192.0
GTEX-13NZB-2126-SM-5MR4Y 183.8
GTEX-ZY6K-1626-SM-5GZWV 183.6
GTEX-13O3O-0826-SM-5K7WE 177.5
GTEX-QEG5-0726-SM-4R1JQ 175.4
GTEX-XYKS-1326-SM-4BRUN 173.9
GTEX-VUSG-2226-SM-4KKZO 172.2
GTEX-11EQ9-1826-SM-5Q5AJ 167.6
GTEX-13FHO-0826-SM-5L3E8 167.3
GTEX-SE5C-2126-SM-4BRUJ 166.0
GTEX-WYBS-0926-SM-3NM94 162.3
GTEX-WI4N-1426-SM-3LK7H 161.6
GTEX-145LT-0726-SM-5S2VM 159.7
GTEX-QEL4-2126-SM-447AE 159.1
GTEX-13CF2-2026-SM-5K7VI 158.7
GTEX-13OW5-2226-SM-5L3HC 158.4
GTEX-X15G-1626-SM-3NMB3 158.2
GTEX-S341-1526-SM-4AD6K 153.2
GTEX-Y5LM-1726-SM-4VDSX 152.7
GTEX-ZU9S-1926-SM-5NQBP 152.7
GTEX-XBED-1626-SM-47JYN 152.6
GTEX-11EMC-2026-SM-5A5JV 152.4
GTEX-ZVT2-1826-SM-5NQ8W 150.3
GTEX-WY7C-2726-SM-3NB3P 150.0
GTEX-132AR-0826-SM-5EGK6 147.4
GTEX-13W3W-1226-SM-5LU4H 146.7
GTEX-11GS4-2126-SM-5A5KR 145.6
GTEX-13S86-1226-SM-5S2OA 143.7
GTEX-11P7K-0726-SM-5EGKX 143.4
GTEX-ZYWO-2326-SM-5GZY4 142.6
GTEX-X4EP-2926-SM-3P5YQ 141.6
GTEX-R55F-1726-SM-2TF4R 138.1
GTEX-XOT4-0726-SM-4GIAW 137.3
GTEX-T6MN-0726-SM-32PML 137.1
GTEX-UPK5-2326-SM-3P5Z8 136.8
GTEX-SIU7-1626-SM-4BRUK 136.3
GTEX-11PRG-0826-SM-5EQ6A 135.3
GTEX-ZTTD-1026-SM-51MRD 134.7
GTEX-ZVTK-0326-SM-51MRR 134.2
GTEX-147F4-2826-SM-5NQBN 133.0
GTEX-T5JW-2026-SM-4DM63 131.9
GTEX-ZEX8-2226-SM-57WC6 130.5
GTEX-X261-0626-SM-3NMD9 129.7
GTEX-Y114-2026-SM-4TT7L 129.3
GTEX-146FH-0826-SM-5SI8T 128.6
GTEX-ZF2S-2026-SM-5E461 128.1
GTEX-ZTX8-1226-SM-4YCE9 127.1
GTEX-139TU-0626-SM-5KM3X 126.4
GTEX-YFC4-1426-SM-5IFJG 125.9
GTEX-ZAJG-0626-SM-5HL8X 125.9
GTEX-T2IS-1526-SM-32QPR 125.0
GTEX-12WSN-1326-SM-5GCNT 124.2
GTEX-131YS-0626-SM-5EGKL 124.1
GTEX-Y3IK-2326-SM-4WWDT 123.8
GTEX-11WQC-1726-SM-5GU4W 123.6
GTEX-13FTY-2226-SM-5J1ND 122.3
GTEX-13D11-1026-SM-5IJFB 122.2
GTEX-Y5V6-2126-SM-4WWFX 121.9
GTEX-132NY-0826-SM-5K7Y7 121.1
GTEX-ZZPU-0626-SM-5E43T 120.9
GTEX-R3RS-0626-SM-48FE1 120.4
GTEX-13PL6-2926-SM-5L3I2 120.1
GTEX-13N11-1726-SM-5J1OJ 120.0
GTEX-ZLV1-1426-SM-4WWES 118.9
GTEX-11DXW-0626-SM-5N9ER 117.9
GTEX-1269C-2426-SM-5FQSN 117.7
GTEX-13QIC-2326-SM-5LU5N 117.4
GTEX-ZC5H-2626-SM-5J2MG 117.2
GTEX-14AS3-1626-SM-5S2OY 117.0
GTEX-VJWN-0726-SM-3GIJ8 116.8
GTEX-WOFL-0826-SM-3MJG1 116.7
GTEX-11TUW-1826-SM-5BC5D 116.3
GTEX-13FTW-1426-SM-5LZWZ 116.3
GTEX-11DZ1-0326-SM-5N9BN 116.1
GTEX-ZPIC-1126-SM-5BC7F 116.1
GTEX-S4P3-1326-SM-4AD6V 115.0
GTEX-WYJK-1326-SM-3NB2T 114.9
GTEX-11EI6-0626-SM-5985T 112.8
GTEX-1122O-1226-SM-5H113 112.4
GTEX-U412-1826-SM-4DXTJ 111.4
GTEX-U3ZH-1426-SM-4DXSR 111.3
GTEX-133LE-1726-SM-5K7VQ 110.4
GTEX-S32W-2026-SM-4AD6E 110.3
GTEX-XUJ4-1926-SM-4BOOV 109.4
GTEX-ZVZQ-0826-SM-51MRF 109.2
GTEX-Y111-2026-SM-4SOJA 108.5
GTEX-13O3Q-2226-SM-5KM4O 107.8
GTEX-ZDXO-0126-SM-5S2ND 107.5
GTEX-11ZTT-2326-SM-5EQLG 105.8
GTEX-1192X-2326-SM-5987X 105.7
GTEX-S33H-0326-SM-4AD6N 105.7
GTEX-RUSQ-2026-SM-4GIAK 105.6
GTEX-Y3I4-1526-SM-4TT7K 105.3
GTEX-WFON-1826-SM-3GILG 104.1
GTEX-1399U-1826-SM-5PNZ1 103.0
GTEX-13NZ8-0126-SM-5IJCT 102.9
GTEX-ZV7C-1826-SM-5NQ83 102.1
GTEX-1314G-1226-SM-5BC6D 101.7
GTEX-1211K-1926-SM-5EQLB 101.5
GTEX-11I78-2226-SM-5PNYA 101.2
GTEX-XUZC-1626-SM-4BRVP 99.5
GTEX-UJHI-1426-SM-3DB9C 99.2
GTEX-RWS6-1926-SM-47JXY 99.1
GTEX-11LCK-2426-SM-5HL5F 99.0
GTEX-X4XY-0926-SM-4E3JD 98.9
GTEX-T2YK-2226-SM-32QPT 98.5
GTEX-WXYG-2226-SM-4E3IM 98.4
GTEX-QDT8-0626-SM-48TYW 98.3
GTEX-111YS-1926-SM-5GICC 97.1
GTEX-1313W-0826-SM-5EQ4T 97.0
GTEX-14E6E-1326-SM-5S2NR 96.2
GTEX-12WSK-2226-SM-5GCO5 95.8
GTEX-QVJO-1826-SM-447C9 94.9
GTEX-131XW-0726-SM-5EGK3 94.5
GTEX-TMMY-0726-SM-33HBE 94.0
GTEX-ZV6S-1826-SM-5NQ8D 93.6
GTEX-RU72-0626-SM-46MUI 93.5
GTEX-11P81-1926-SM-5BC53 93.3
GTEX-ZF29-1926-SM-5S2P1 93.2
GTEX-Q2AG-0326-SM-48U1O 92.2
GTEX-XMD2-0926-SM-4WWEF 92.2
GTEX-ZVE2-1226-SM-5NQ8R 91.4
GTEX-ZYW4-0826-SM-5GIDG 90.3
GTEX-XUW1-2326-SM-4BOO5 90.0
GTEX-ZVT4-1026-SM-57WC4 89.3
GTEX-145MN-1926-SM-5SIAI 89.2
GTEX-ZDYS-1126-SM-5K7UB 89.0
GTEX-11ONC-2126-SM-5HL6E 88.0
GTEX-ZF3C-2326-SM-5S2MZ 87.8
GTEX-Y8LW-1626-SM-5IFHX 86.2
GTEX-1117F-2826-SM-5GZXL 85.6
GTEX-13113-1726-SM-5GCOO 85.6
GTEX-XV7Q-2326-SM-4BRVZ 85.5
GTEX-11EM3-1326-SM-5N9C6 85.0
GTEX-12ZZX-1126-SM-5EGKB 84.6
GTEX-WYVS-1726-SM-3NMAY 84.5
GTEX-U3ZN-1926-SM-4DXSG 84.4
GTEX-TML8-1226-SM-32QON 84.1
GTEX-WRHU-0326-SM-3MJFY 83.6
GTEX-11WQK-2426-SM-5GU5C 82.7
GTEX-Y5V5-2126-SM-4WWFO 81.1
GTEX-11GSO-1926-SM-5A5K3 80.4
GTEX-11NSD-0926-SM-5N9DR 78.1
GTEX-S4Q7-1126-SM-4AD6R 78.1
GTEX-YFCO-1826-SM-4W1YH 77.5
GTEX-145MO-0826-SM-5NQBL 77.3
GTEX-13CF3-2126-SM-5IFJP 76.7
GTEX-W5X1-2326-SM-3GIL6 76.2
GTEX-ZXES-0826-SM-5E43C 76.1
GTEX-13O3P-0826-SM-5L3DH 75.3
GTEX-11OF3-1926-SM-59889 75.1
GTEX-13W46-0826-SM-5LU3H 75.0
GTEX-YJ8O-2226-SM-5IFHW 74.8
GTEX-11O72-2126-SM-5N9FO 72.4
GTEX-ZWKS-2826-SM-5NQ74 71.6
GTEX-ZYFC-0826-SM-5E44K 71.2
GTEX-11NV4-2026-SM-5N9DG 70.8
GTEX-ZDTT-2126-SM-5S2OJ 69.7
GTEX-12BJ1-1826-SM-5HL9N 69.5
GTEX-XMD1-0826-SM-4AT52 67.9
GTEX-R53T-1526-SM-48FEK 66.4
GTEX-117YX-1426-SM-5H12H 66.1
GTEX-T6MO-0326-SM-32QOK 65.1
GTEX-TKQ2-1826-SM-33HB2 64.9
GTEX-11ZUS-0826-SM-5FQUY 64.2
GTEX-12WSB-0626-SM-59HJO 64.0
GTEX-REY6-2426-SM-48FF5 63.7
GTEX-144GL-2026-SM-5LU3O 63.5
GTEX-S4UY-0726-SM-4AD6X 63.4
GTEX-139T8-0826-SM-5L3DE 63.3
GTEX-S7SE-0826-SM-4AT4D 62.5
GTEX-13OW8-0226-SM-5K7UP 61.9
GTEX-12WSM-1726-SM-5BC6J 61.4
GTEX-139T6-1626-SM-5PNYZ 61.4
GTEX-R55D-0826-SM-48FEA 61.0
GTEX-YB5K-1626-SM-5IFIN 59.7
GTEX-ZAB4-2526-SM-5HL8M 58.5
GTEX-XQ3S-1326-SM-4BOPQ 58.2
GTEX-XQ8I-2426-SM-4WAXY 58.2
GTEX-ZUA1-1526-SM-59HLS 58.2
GTEX-13FTX-1126-SM-5N9EN 58.0
GTEX-ZA64-1526-SM-5CVMD 57.5
GTEX-Y8E4-1626-SM-5S2MW 57.1
GTEX-11DXY-2326-SM-5GICW 54.8
GTEX-117XS-1926-SM-5GICO 54.4
GTEX-13O61-1826-SM-5KM4I 54.0
GTEX-ZYT6-0126-SM-5E45J 52.4
GTEX-144GM-0926-SM-5O994 52.2
GTEX-13PVQ-1026-SM-5KM3M 51.8
GTEX-ZQG8-0726-SM-5P9H9 49.5
GTEX-11DXZ-1926-SM-5GZZL 49.1
GTEX-QMRM-1626-SM-4R1KV 48.2
GTEX-YEC3-1026-SM-5IFI5 47.7
GTEX-YB5E-1726-SM-5IFJ3 47.0
GTEX-13N1W-0626-SM-5MR4U 46.4
GTEX-XGQ4-0926-SM-4AT4U 43.8
GTEX-ZT9W-2026-SM-51MRA 43.6
GTEX-132Q8-1426-SM-5EGK7 43.3
GTEX-14753-2426-SM-5LU8U 42.2
GTEX-ZQUD-1926-SM-51MSA 40.2
GTEX-ZLFU-2126-SM-4WWEV 39.8
GTEX-11P82-1326-SM-5HL62 38.4
GTEX-12KS4-0126-SM-5Q5A5 37.8
GTEX-Y9LG-1426-SM-5IFJZ 37.7
GTEX-UTHO-1026-SM-3GAF7 35.7
GTEX-PSDG-1626-SM-48TCQ 35.4
GTEX-ZZ64-1226-SM-5E43R 34.5
GTEX-145ME-1526-SM-5Q5F2 33.6
GTEX-XMK1-1126-SM-4IHJ8 28.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

458.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 458.9
FF:10080-102A8 77 years, female 458.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.