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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:198.0RPKM
FANTOM5:1109.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Glial cells

Not detected   Medium  

Neuronal cells

Medium   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

198.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 198.0
Samples: 117

Max RPKM: 312.7
Min RPKM: 91.8
Std RPKM: 50.5
Median RPKM: 201.1
GTEX-13X6K-0011-R5b-SM-5PNUE 312.7
GTEX-13G51-0011-R5a-SM-5L3EB 308.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 297.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 293.4
GTEX-T6MN-0011-R5A-SM-32QPD 293.2
GTEX-131YS-0011-R5b-SM-5K7YB 288.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 282.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 280.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 271.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 268.9
GTEX-ZUA1-0011-R5b-SM-51MTG 263.0
GTEX-1313W-0011-R5b-SM-5L3EP 261.4
GTEX-13JUV-0011-R5a-SM-5LZY5 259.5
GTEX-12WSC-0011-R5b-SM-5CVNS 257.6
GTEX-11H98-0011-R5b-SM-57WCF 256.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 252.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 248.1
GTEX-P44H-0011-R5A-SM-2XCEX 247.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 244.4
GTEX-132Q8-0011-R5a-SM-5IJDM 243.1
GTEX-11GSP-0011-R5a-SM-57WBE 243.0
GTEX-13OW6-0011-R5a-SM-5O9BK 242.4
GTEX-13SLX-0011-R5a-SM-5O9BV 242.4
GTEX-13NYS-0011-R5a-SM-5MR4D 241.1
GTEX-S7SE-0011-R5A-SM-2XCDA 238.6
GTEX-13FLV-0011-R5a-SM-5LZWT 238.2
GTEX-N7MT-0011-R5a-SM-2I3G6 237.8
GTEX-1399T-0011-R5b-SM-5IJDK 233.3
GTEX-13VXU-0011-R5a-SM-5O9D7 233.2
GTEX-N7MS-0011-R5a-SM-2HMK8 233.1
GTEX-WWYW-0011-R5A-SM-3NB3E 232.8
GTEX-T5JC-0011-R5A-SM-32PLK 230.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 227.7
GTEX-139TT-0011-R5b-SM-5K7W8 225.8
GTEX-13OVL-0011-R5b-SM-5L3FU 225.3
GTEX-145MH-0011-R5a-SM-5P9JT 225.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 224.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 224.6
GTEX-145LS-0011-R5a-SM-5SI65 224.2
GTEX-QVJO-0011-R5A-SM-2S1QM 223.4
GTEX-13X6J-0011-R5b-SM-5PNWT 220.5
GTEX-13OW7-0011-R5b-SM-5O9DM 219.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 218.7
GTEX-WVLH-0011-R5A-SM-3MJFW 218.7
GTEX-R55E-0011-R5A-SM-2TC5N 218.6
GTEX-11OF3-0011-R5a-SM-57WB4 218.4
GTEX-TSE9-0011-R5A-SM-3DB7J 216.9
GTEX-WZTO-0011-R5B-SM-3NMC5 215.3
GTEX-139T8-0011-R5b-SM-5J1MO 215.1
GTEX-13OVH-0011-R5b-SM-5KM4L 207.9
GTEX-13FLW-0011-R5a-SM-5LZX6 205.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 204.7
GTEX-14BIM-0011-R5b-SM-5S2RM 204.5
GTEX-RU72-0011-R5A-SM-2TF6U 204.4
GTEX-13FXS-0011-R5b-SM-5LZYE 204.0
GTEX-13JVG-0011-R5a-SM-5MR4O 202.6
GTEX-13O3O-0011-R5b-SM-5KM44 202.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 202.2
GTEX-T2IS-0011-R5A-SM-32QP4 201.1
GTEX-13OW5-0011-R5b-SM-5L3FR 200.6
GTEX-14ABY-0011-R5b-SM-5SI7B 200.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 197.2
GTEX-OHPN-0011-R5A-SM-2I5FF 197.2
GTEX-13NYB-0011-R5a-SM-5MR45 195.9
GTEX-13S7M-0011-R5b-SM-5P9HS 194.4
GTEX-13CZV-0011-R5a-SM-5K7XA 193.8
GTEX-11NV4-0011-R5a-SM-5NQ88 191.6
GTEX-12WSB-0011-R5b-SM-5GU67 191.6
GTEX-XOTO-0011-R5A-SM-4B657 190.6
GTEX-XMD1-0011-R5A-SM-4AT47 190.4
GTEX-X585-0011-R5A-SM-46MVI 188.0
GTEX-12ZZX-0011-R5a-SM-5HL89 185.6
GTEX-UTHO-0011-R5A-SM-3GIJD 184.3
GTEX-YFC4-0011-R5a-SM-4RGLR 183.1
GTEX-12WSD-0011-R5b-SM-5CVNG 180.3
GTEX-NL4W-0011-R5a-SM-2I3GD 179.3
GTEX-ZE7O-0011-R5a-SM-57WBO 179.0
GTEX-RVPV-0011-R5A-SM-2TF69 177.8
GTEX-RVPU-0011-R5A-SM-2XCAD 173.6
GTEX-13X6I-0011-R5a-SM-5PNWW 172.7
GTEX-12WSA-0011-R5b-SM-5GU5I 171.0
GTEX-WL46-0011-R5A-SM-3LK6V 167.3
GTEX-X261-0011-R5A-SM-3NMB4 166.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 166.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 165.7
GTEX-NL3H-0011-R5a-SM-2I3GB 165.2
GTEX-PVOW-0011-R5A-SM-32PL7 165.1
GTEX-139TS-0011-R5b-SM-5J2MZ 162.6
GTEX-1445S-0011-R5a-SM-5PNUS 161.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 159.2
GTEX-QMR6-0011-R5A-SM-32PKT 155.2
GTEX-144GO-0011-R5a-SM-5PNUR 154.1
GTEX-OXRN-0011-R5A-SM-2I5EF 151.0
GTEX-ZXG5-0011-R5b-SM-57WBN 149.3
GTEX-144GL-0011-R5b-SM-5PNUJ 148.2
GTEX-13CIG-0011-R5b-SM-5L3F2 147.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 146.9
GTEX-14BIN-0011-R5b-SM-5SI78 146.3
GTEX-12WSF-0011-R5a-SM-5HL8K 146.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 145.9
GTEX-ZV68-0011-R5a-SM-4YCDW 145.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 142.3
GTEX-13112-0011-R5b-SM-5DUV8 138.7
GTEX-ZVT3-0011-R5a-SM-51MSI 134.5
GTEX-NPJ7-0011-R5a-SM-33HBK 130.7
GTEX-YJ89-0011-R5a-SM-4V6GM 128.1
GTEX-13CF2-0011-R5a-SM-5LZWS 126.1
GTEX-X4XX-0011-R5A-SM-46MWN 125.4
GTEX-11UD1-0011-R5b-SM-5P9FP 118.9
GTEX-Z93S-0011-R5b-SM-4RGNI 117.9
GTEX-11WQC-0011-R5a-SM-5BC74 112.3
GTEX-S7PM-0011-R5A-SM-3NM8G 105.4
GTEX-12WSH-0011-R5b-SM-5P9F3 97.7
GTEX-13FHP-0011-R5b-SM-5LZY2 95.4
GTEX-145MG-0011-R5b-SM-5S2VU 94.8
GTEX-13NZA-0011-R5b-SM-5KM4K 94.4
GTEX-1477Z-0011-R5b-SM-5PNUO 91.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

1109.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 1109.5
FF:10379-105H1 89 years, female 1253.9
FF:10164-103B2 76 years, female 965.1

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