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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:751.2TPM
GTEx:259.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Endothelial cells

Low   Medium  

Glial cells

Low   Low  

Neuronal cells

Medium   Not detected  

Neuropil

Medium   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

751.2

N/A Male, age 5
Sample 1
TPM: 696.6
overview Female, age 40
Sample 2
TPM: 560.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 996.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

259.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 257.3
Samples: 114

Max RPKM: 375.6
Min RPKM: 119.2
Std RPKM: 57.9
Median RPKM: 264.4
GTEX-14BMV-3026-SM-5S2PQ 375.6
GTEX-12WSC-3026-SM-5GCNF 355.0
GTEX-11DXY-3226-SM-5GIDE 349.4
GTEX-X585-3026-SM-46MWF 349.1
GTEX-117XS-3026-SM-5N9CA 344.3
GTEX-ZYFD-3026-SM-5E44C 344.1
GTEX-WWYW-3126-SM-3NB39 339.2
GTEX-WVLH-3026-SM-3MJG9 338.9
GTEX-13FXS-3126-SM-5J2NN 337.2
GTEX-13VXU-2926-SM-5LU5C 329.1
GTEX-WL46-2926-SM-3LK82 326.8
GTEX-13SLX-3126-SM-5S2Q5 326.5
GTEX-WHSE-3026-SM-3P5ZH 325.5
GTEX-11ONC-2926-SM-5P9JM 318.3
GTEX-144FL-3026-SM-5O99C 318.0
GTEX-13OW8-2826-SM-5L3GC 316.8
GTEX-1313W-3126-SM-5LZUI 314.8
GTEX-145MH-3026-SM-5Q5DZ 313.7
GTEX-13OW6-3026-SM-5J2MI 312.2
GTEX-145MF-2726-SM-5O995 312.1
GTEX-T5JC-2426-SM-3NMDB 310.2
GTEX-ZUA1-3026-SM-59HJC 308.5
GTEX-13NYC-2826-SM-5K7WR 308.3
GTEX-T6MN-2626-SM-32PMQ 307.0
GTEX-14ASI-3026-SM-5S2PN 306.8
GTEX-12ZZX-2926-SM-5GCOQ 305.8
GTEX-11PRG-2926-SM-5987A 304.8
GTEX-11GSO-2926-SM-5HL73 304.3
GTEX-12ZZY-3026-SM-5GCOU 303.2
GTEX-YJ89-3026-SM-5IFJI 303.0
GTEX-YFC4-3126-SM-5PNV6 302.1
GTEX-13FHO-3026-SM-5J1O9 302.0
GTEX-11NUK-2926-SM-5A5MD 299.8
GTEX-XOTO-3026-SM-4B65M 299.8
GTEX-QVJO-1426-SM-2S1QY 298.7
GTEX-12ZZW-2926-SM-5LZUP 296.3
GTEX-13O3Q-2926-SM-5KM45 293.4
GTEX-11DXW-1126-SM-5H12Q 292.4
GTEX-RNOR-2326-SM-2TF4I 292.3
GTEX-12126-1026-SM-5P9JJ 292.0
GTEX-R55F-1326-SM-5S2V4 291.8
GTEX-13OVH-3026-SM-5MR4N 289.9
GTEX-11ZUS-2926-SM-5FQSL 289.8
GTEX-WZTO-2926-SM-3NM9I 289.6
GTEX-13FLW-1426-SM-5K7YE 284.9
GTEX-144GL-3026-SM-5Q5CW 284.5
GTEX-TSE9-3026-SM-3DB76 282.7
GTEX-131YS-3126-SM-5KLYT 281.6
GTEX-ZVT3-3026-SM-5E43N 281.3
GTEX-145LS-3126-SM-5Q5BY 279.8
GTEX-145MG-3026-SM-5RQJA 277.0
GTEX-13NYS-3126-SM-5KLYV 276.2
GTEX-11OC5-0726-SM-5P9JK 274.9
GTEX-Q2AG-2926-SM-2HMJ3 274.9
GTEX-PVOW-2526-SM-2XCF7 274.5
GTEX-ZAK1-3026-SM-5S2MJ 273.5
GTEX-Z93S-2926-SM-57WB9 266.1
GTEX-13O3O-3126-SM-5KM3H 262.7
GTEX-132Q8-3026-SM-5PNVG 259.6
GTEX-X4XX-3026-SM-3NMB2 259.5
GTEX-1128S-2726-SM-5H12C 257.9
GTEX-T2IS-3026-SM-32QPM 255.9
GTEX-QMR6-1426-SM-32PLA 255.4
GTEX-NPJ8-1526-SM-2D7VU 254.7
GTEX-11GS4-3126-SM-5A5LH 252.2
GTEX-1399T-3026-SM-5KLZC 251.7
GTEX-Y111-2726-SM-4TT3N 251.5
GTEX-14A5I-2926-SM-5Q5CQ 250.1
GTEX-XLM4-3026-SM-4AT6L 245.3
GTEX-1192X-3126-SM-5N9BY 241.2
GTEX-OXRN-2426-SM-2I5EQ 240.9
GTEX-NPJ7-2726-SM-2I3FT 239.7
GTEX-13QIC-2926-SM-5J2NF 237.7
GTEX-Y8DK-0826-SM-4TT3T 235.3
GTEX-111FC-3126-SM-5GZZ2 234.1
GTEX-13NYB-3026-SM-5IJD7 230.8
GTEX-RU72-3026-SM-5SI7Y 226.0
GTEX-QVUS-2826-SM-3GADB 225.9
GTEX-131XW-3126-SM-5LZUC 223.2
GTEX-13PL6-3126-SM-5LUAR 221.2
GTEX-139T8-1026-SM-5J2MC 220.0
GTEX-12WSH-3026-SM-5CVNI 216.4
GTEX-QDT8-2926-SM-32PKC 214.2
GTEX-ZE7O-3126-SM-5HL5X 213.2
GTEX-13FHP-3026-SM-5IJBS 210.4
GTEX-13OVJ-2826-SM-5L3GW 210.4
GTEX-1117F-3226-SM-5N9CT 209.8
GTEX-12ZZZ-3026-SM-5BC67 209.2
GTEX-11EI6-3026-SM-5GZZO 208.9
GTEX-12WSD-3126-SM-5HL7P 208.0
GTEX-11EMC-3226-SM-5EGKW 207.0
GTEX-13S7M-3126-SM-5RQJQ 201.2
GTEX-13X6J-3026-SM-5Q5CU 199.7
GTEX-11WQK-3026-SM-5EQL6 196.0
GTEX-13X6K-2926-SM-5Q5D5 193.4
GTEX-UTHO-3026-SM-3GAFB 192.7
GTEX-ZZPT-3026-SM-5GZXH 191.1
GTEX-11OF3-2926-SM-5HL78 191.0
GTEX-13JVG-3126-SM-5L3FH 189.2
GTEX-13JUV-2926-SM-5LZX7 187.6
GTEX-13OW7-3026-SM-5L3GY 185.1
GTEX-ZAJG-3126-SM-5HL9J 181.7
GTEX-11GSP-3226-SM-5986O 180.0
GTEX-1445S-3026-SM-5O9BR 178.3
GTEX-11O72-2926-SM-5BC4V 173.4
GTEX-13PVQ-3026-SM-5SI93 172.1
GTEX-147GR-3026-SM-5S2ML 158.2
GTEX-13G51-3026-SM-5IJB8 148.4
GTEX-13IVO-2926-SM-5L3CZ 145.0
GTEX-11TTK-2926-SM-5PNYP 144.5
GTEX-PWO3-0926-SM-2I5EY 142.7
GTEX-11NV4-2126-SM-5N9DS 140.1
GTEX-N7MT-1126-SM-5SI7V 130.2
GTEX-12WSA-2926-SM-5EQ4D 119.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 262.1
Samples: 108

Max RPKM: 420.7
Min RPKM: 104.1
Std RPKM: 73.7
Median RPKM: 274.2
GTEX-X585-0011-R10A-SM-46MUY 420.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 401.4
GTEX-145MG-0011-R10a-SM-5PNWG 390.2
GTEX-13NYS-0011-R10a-SM-5MR4S 384.8
GTEX-NL3H-0011-R10A-SM-2I3E9 372.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 365.5
GTEX-12WSC-0011-R10a-SM-5GU57 359.2
GTEX-T6MN-0011-R10A-SM-32QP7 357.4
GTEX-13X6K-0011-R10a-SM-5P9JR 357.1
GTEX-12WSE-0011-R10b-SM-5P9JV 352.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 350.2
GTEX-1313W-0011-R10b-SM-5DUXA 349.6
GTEX-131YS-0011-R10b-SM-5EQ5N 348.3
GTEX-WL46-0011-R10A-SM-3MJFQ 345.8
GTEX-WVLH-0011-R10A-SM-3MJFM 343.3
GTEX-145MH-0011-R10b-SM-5PNUK 342.9
GTEX-13O3Q-0011-R10b-SM-5KM39 341.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 340.3
GTEX-WZTO-0011-R10B-SM-4E3KB 331.6
GTEX-12WSF-0011-R10a-SM-5LZVH 331.5
GTEX-13OW7-0011-R10a-SM-5L3H3 331.4
GTEX-13S7M-0011-R10b-SM-5PNZB 329.2
GTEX-131XH-0011-R10a-SM-5EGLJ 328.3
GTEX-T5JC-0011-R10A-SM-32PM2 327.5
GTEX-13FHO-0011-R10b-SM-5J2MM 327.3
GTEX-14BIN-0011-R10a-SM-5S2UA 324.8
GTEX-13SLX-0011-R10a-SM-5P9HV 324.5
GTEX-13N1W-0011-R10b-SM-5MR4H 323.3
GTEX-12WSM-0011-R10a-SM-5DUWV 321.5
GTEX-S7SE-0011-R10A-SM-2XCDF 318.5
GTEX-147GR-0011-R10b-SM-5S2UM 318.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 316.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 313.1
GTEX-13X6J-0011-R10b-SM-5PNWA 309.5
GTEX-13O3O-0011-R10a-SM-5LUA9 306.5
GTEX-13FXS-0011-R10a-SM-5J2MA 305.6
GTEX-XLM4-0011-R10A-SM-4AT5P 305.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 305.0
GTEX-11H98-0011-R10b-SM-5NQ98 302.4
GTEX-N7MS-0011-R10A-SM-2HMJK 301.8
GTEX-13QIC-0011-R10a-SM-5O9C7 299.7
GTEX-14BIL-0011-R10a-SM-5SI75 298.2
GTEX-145LS-0011-R10a-SM-5PNUQ 297.5
GTEX-13CZV-0011-R10b-SM-5LZYD 295.3
GTEX-YFC4-0011-R10a-SM-4SOK5 293.0
GTEX-13QJC-0011-R10a-SM-5SI63 292.4
GTEX-WWYW-0011-R10A-SM-3NB35 291.8
GTEX-X4XX-0011-R10B-SM-46MWO 291.8
GTEX-ZF28-0011-R10a-SM-4WWEH 290.1
GTEX-132Q8-0011-R10b-SM-5DUWZ 286.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 286.2
GTEX-13OVL-0011-R10a-SM-5L3GS 283.4
GTEX-13OW6-0011-R10a-SM-5L3HE 279.9
GTEX-YJ89-0011-R10a-SM-4SOK9 278.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 269.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 265.3
GTEX-13FLW-0011-R10b-SM-5LZZF 265.1
GTEX-N7MT-0011-R10A-SM-2I3E1 260.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 260.0
GTEX-147F4-0011-R10b-SM-5S2WC 250.8
GTEX-13NYB-0011-R10a-SM-5KM43 247.2
GTEX-145LU-0011-R10a-SM-5PNWJ 246.9
GTEX-12WSH-0011-R10a-SM-5LZUS 245.1
GTEX-X4EP-0011-R10B-SM-4QASJ 241.6
GTEX-13OW8-0011-R10a-SM-5L3H6 236.5
GTEX-13X6I-0011-R10a-SM-5PNWI 233.9
GTEX-QMR6-0011-R10A-SM-32PKO 229.6
GTEX-13N2G-0011-R10a-SM-5MR34 227.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 225.6
GTEX-TSE9-0011-R10A-SM-3DB7O 225.2
GTEX-QDT8-0011-R10A-SM-32PKG 223.6
GTEX-RVPU-0011-R10A-SM-2XCAH 222.9
GTEX-ZUA1-0011-R10a-SM-51MT6 219.3
GTEX-13G51-0011-R10b-SM-5LZYF 219.0
GTEX-13JUV-0011-R10b-SM-5LZXR 217.6
GTEX-Z93S-0011-R10a-SM-4RGNM 215.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 214.6
GTEX-QVUS-0011-R10A-SM-3GIK3 212.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 211.5
GTEX-12WSD-0011-R10b-SM-5GU79 210.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 204.7
GTEX-ZVT3-0011-R10b-SM-57WB6 202.3
GTEX-OXRN-0011-R10A-SM-2I5GC 201.7
GTEX-11WQC-0011-R10a-SM-57WCT 201.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 200.1
GTEX-13SLW-0011-R10a-SM-5S2UI 193.9
GTEX-12126-0011-R10b-SM-5BC6T 192.4
GTEX-NL4W-0011-R10A-SM-2I3DY 191.8
GTEX-P44H-0011-R10A-SM-2XCEK 190.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 179.8
GTEX-X261-0011-R10B-SM-4E3JT 176.5
GTEX-1445S-0011-R10a-SM-5PNWB 172.2
GTEX-ZV68-0011-R10a-SM-51MT7 163.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 161.6
GTEX-11WQK-0011-R10a-SM-5BC6R 160.3
GTEX-139TS-0011-R10a-SM-5K7TU 160.1
GTEX-1477Z-0011-R10b-SM-5S2RF 157.6
GTEX-131XW-0011-R10a-SM-5DUVA 156.5
GTEX-13NZA-0011-R10b-SM-5KM54 154.0
GTEX-13JVG-0011-R10b-SM-5KM2P 153.4
GTEX-11ZUS-0011-R10b-SM-5BC79 152.2
GTEX-ZXG5-0011-R10a-SM-57WDD 143.1
GTEX-12WSA-0011-R10b-SM-5P9ET 140.8
GTEX-14753-0011-R10b-SM-5S2WE 136.1
GTEX-OXRO-0011-R10A-SM-2I5EH 132.6
GTEX-XMD1-0011-R10A-SM-4AT4A 127.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 110.7
GTEX-13IVO-0011-R10a-SM-5LZY3 104.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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