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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:139.4RPKM
FANTOM5:1007.3Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Glial cells

Low   Medium  

Neuronal cells

Low   Not detected  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

139.4

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 139.4
Samples: 94

Max RPKM: 298.1
Min RPKM: 40.7
Std RPKM: 58.4
Median RPKM: 132
GTEX-WHSE-0011-R1A-SM-3P5ZK 298.1
GTEX-13JUV-0011-R1a-SM-5LZY4 279.4
GTEX-131XH-0011-R1a-SM-5DUWA 270.2
GTEX-RNOR-0011-R1A-SM-5SI8F 245.8
GTEX-WWYW-0011-R1A-SM-3TW8G 244.5
GTEX-N7MS-0011-R1a-SM-2HMJG 241.4
GTEX-13O3O-0011-R1b-SM-5KM2K 229.1
GTEX-T6MN-0011-R1A-SM-32QOY 223.0
GTEX-1313W-0011-R1b-SM-5EQ4A 218.2
GTEX-145MH-0011-R1b-SM-5PNWY 213.0
GTEX-X585-0011-R1B-SM-46MVE 210.2
GTEX-13NYS-0011-R1b-SM-5MR55 208.3
GTEX-WL46-0011-R1A-SM-3LK6M 207.4
GTEX-12WSF-0011-R1a-SM-5DUVI 206.3
GTEX-13FXS-0011-R1a-SM-5K7U6 204.4
GTEX-13OW5-0011-R1b-SM-5L3GE 203.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 201.4
GTEX-T5JC-0011-R1A-SM-32PM6 201.0
GTEX-QVUS-0011-R1A-SM-3GAD2 195.5
GTEX-139TT-0011-R1a-SM-5LZVD 195.1
GTEX-13G51-0011-R1a-SM-5LZYR 194.9
GTEX-12WSE-0011-R1b-SM-5GU4V 191.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 185.3
GTEX-13N1W-0011-R1b-SM-5MR4T 180.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 180.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 175.3
GTEX-YFC4-0011-R1a-SM-4V6EH 171.7
GTEX-R55E-0011-R1A-SM-2TC6N 169.6
GTEX-TSE9-0011-R1A-SM-3DB7E 167.2
GTEX-13FHO-0011-R1b-SM-5KLZG 167.0
GTEX-XOTO-0011-R1B-SM-4B65C 166.7
GTEX-QVJO-0011-R1A-SM-2S1QI 160.9
GTEX-144GL-0011-R1a-SM-5PNZ5 160.6
GTEX-11ONC-0011-R1a-SM-57WD4 152.5
GTEX-13FLW-0011-R1b-SM-5LZX2 150.4
GTEX-13X6I-0011-R1b-SM-5PNZC 150.2
GTEX-QDT8-0011-R1A-SM-32PKS 149.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 148.3
GTEX-P44H-0011-R1A-SM-3NM8J 147.9
GTEX-13N2G-0011-R1b-SM-5MR3G 146.4
GTEX-PVOW-0011-R1A-SM-32PL6 145.9
GTEX-13NYB-0011-R1b-SM-5KM4F 143.6
GTEX-12WSH-0011-R1a-SM-5GU5V 143.2
GTEX-12WSD-0011-R1b-SM-5LZVY 139.5
GTEX-131YS-0011-R1a-SM-5DUXC 135.4
GTEX-S7SE-0011-R1A-SM-2XCDE 133.6
GTEX-ZAB4-0011-R1a-SM-4RGNO 132.7
GTEX-X4XX-0011-R1B-SM-3P622 131.2
GTEX-N7MT-0011-R1a-SM-5SI7S 131.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 129.3
GTEX-12WSM-0011-R1a-SM-5LZW6 127.9
GTEX-1399T-0011-R1b-SM-5DUWN 126.6
GTEX-13SLW-0011-R1a-SM-5S2W7 125.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 122.1
GTEX-QMR6-0011-R1A-SM-32PKW 121.3
GTEX-WVLH-0011-R1A-SM-4MVOK 120.5
GTEX-14ASI-0011-R1b-SM-5S2TY 118.9
GTEX-13OW7-0011-R1b-SM-5L3HF 117.8
GTEX-WZTO-0011-R1B-SM-3NMAR 117.1
GTEX-NPJ7-0011-R1a-SM-3GACT 116.7
GTEX-145LS-0011-R1b-SM-5PNUP 115.4
GTEX-13OW8-0011-R1a-SM-5L3HI 114.4
GTEX-13S7M-0011-R1b-SM-5PNZE 111.5
GTEX-13OVL-0011-R1a-SM-5L3H5 108.8
GTEX-11GSO-0011-R1b-SM-57WD3 107.3
GTEX-13JVG-0011-R1a-SM-5KM32 106.7
GTEX-13112-0011-R1b-SM-5HL7K 106.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 104.0
GTEX-PWO3-0011-R1A-SM-2I5EW 102.6
GTEX-132Q8-0011-R1a-SM-5EGLK 100.8
GTEX-139T8-0011-R1a-SM-5HL75 88.0
GTEX-13QJC-0011-R1b-SM-5S2UU 85.9
GTEX-XMD1-0011-R1A-SM-4AT4C 81.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 80.7
GTEX-13PDP-0011-R1a-SM-5PNX5 80.3
GTEX-NL3H-0011-R1a-SM-48TDJ 79.5
GTEX-145LU-0011-R1a-SM-5Q5CE 79.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 79.2
GTEX-1212Z-0011-R1b-SM-5BC72 77.4
GTEX-11ZTS-0011-R1a-SM-5BC71 75.6
GTEX-UTHO-0011-R1A-SM-3GIJO 71.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 71.5
GTEX-NPJ8-0011-R1a-SM-33HCB 71.5
GTEX-ZF28-0011-R1a-SM-4WWD1 66.4
GTEX-11UD1-0011-R1b-SM-5BC7D 65.4
GTEX-13CF2-0011-R1a-SM-5LZY1 61.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 58.2
GTEX-13FTY-0011-R1a-SM-5LZXE 58.1
GTEX-YJ89-0011-R1a-SM-4RGLS 57.5
GTEX-13FHP-0011-R1b-SM-5K7XL 55.9
GTEX-12WSB-0011-R1b-SM-5P9EY 54.0
GTEX-13NZA-0011-R1b-SM-5LUAF 52.6
GTEX-ZE7O-0011-R1a-SM-57WDM 41.6
GTEX-144GO-0011-R1a-SM-5PNWO 40.7
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

1007.3

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 1007.3
FF:10374-105G5 89 years, female 1323.5
FF:10169-103B7 60 years, female 1058.9
FF:10153-102I9 76 years, female 639.6

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by the Knut & Alice Wallenberg foundation.