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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.7TPM
GTEx:9.1RPKM
FANTOM5:44.5Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Bile duct cells

Medium   Low  

Hepatocytes

Not detected   Not detected  
   
   
   

LIVER - HPA RNA-seq

Average TPM

17.7

N/A Female, age 60
Sample 1
TPM: 22.9
overview Male, age 54
Sample 2
TPM: 23.6
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 17.8
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 6.7
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 10.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 16.5
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 15.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 10.9
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 9.9
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 42.3
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

9.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 9.1
Samples: 119

Max RPKM: 52.5
Min RPKM: 2
Std RPKM: 8.9
Median RPKM: 6.4
GTEX-1497J-0726-SM-5Q5D1 52.5
GTEX-ZTPG-1426-SM-51MT3 49.9
GTEX-YB5E-0326-SM-5IFHU 37.4
GTEX-S32W-1926-SM-4AD63 33.1
GTEX-ZAB4-0826-SM-5LU9D 32.5
GTEX-13N11-0926-SM-5IJG2 32.3
GTEX-131XE-0326-SM-5LZVO 30.9
GTEX-ZYY3-0626-SM-5NQ6W 24.5
GTEX-14C38-1526-SM-5RQJ7 23.0
GTEX-QDVN-0826-SM-48TZ2 22.6
GTEX-Q734-0326-SM-48U15 21.7
GTEX-12WSG-0626-SM-5FQTQ 20.9
GTEX-13NZ9-1326-SM-5MR3V 19.5
GTEX-UTHO-2426-SM-4JBHD 19.4
GTEX-QEL4-1226-SM-447A4 18.9
GTEX-139YR-0226-SM-5IFEM 17.7
GTEX-WYVS-1926-SM-4PQZ2 17.7
GTEX-13113-1326-SM-5GCOI 14.3
GTEX-146FH-1526-SM-5NQBU 12.7
GTEX-Y5LM-0426-SM-4VBRO 11.3
GTEX-144GM-1326-SM-5LU5E 11.1
GTEX-11EQ9-0526-SM-5A5JZ 10.4
GTEX-13FTW-1126-SM-5J2NV 10.4
GTEX-ZAB5-0426-SM-5CVMI 10.3
GTEX-PX3G-0826-SM-48TZS 9.9
GTEX-12KS4-1326-SM-5LUB3 9.5
GTEX-VUSG-0126-SM-4KL1X 9.4
GTEX-S33H-1626-SM-4AD68 9.1
GTEX-WFON-1726-SM-4LVMQ 9.0
GTEX-147F4-1426-SM-5LUA8 8.9
GTEX-P78B-1326-SM-3P611 8.9
GTEX-TKQ2-1726-SM-4DXUP 8.8
GTEX-UPK5-1426-SM-4JBHH 8.5
GTEX-12WSI-0226-SM-5GCNA 8.4
GTEX-13QJC-0726-SM-5RQJK 8.0
GTEX-11GSP-0626-SM-5986T 7.8
GTEX-REY6-1226-SM-48FDR 7.8
GTEX-11DXZ-0126-SM-5EGGY 7.7
GTEX-S4Z8-0526-SM-4AD4T 7.7
GTEX-1399R-1226-SM-5P9GF 7.6
GTEX-OOBJ-0826-SM-3NB2K 7.6
GTEX-T6MN-1226-SM-3NMA5 7.4
GTEX-ZPU1-0826-SM-57WG2 7.3
GTEX-12WSD-1426-SM-5GCN9 7.2
GTEX-X4EP-1026-SM-4QAS5 7.2
GTEX-ZVP2-0626-SM-51MSO 7.2
GTEX-QV44-0326-SM-4R1KD 7.0
GTEX-X261-1726-SM-4PQYT 7.0
GTEX-QESD-2026-SM-447BI 6.9
GTEX-UPIC-0926-SM-4IHLV 6.9
GTEX-X3Y1-2726-SM-4PQZH 6.9
GTEX-ZF2S-3026-SM-4WWCH 6.9
GTEX-XBEC-1526-SM-4AT68 6.8
GTEX-11WQC-0726-SM-5EQMR 6.7
GTEX-1269C-0626-SM-5FQSS 6.6
GTEX-Z9EW-0426-SM-5CVM9 6.6
GTEX-ZF29-2026-SM-4WWB7 6.6
GTEX-Q2AG-1126-SM-48U1P 6.5
GTEX-139TU-0826-SM-5IJFG 6.4
GTEX-RWSA-1426-SM-47JXA 6.4
GTEX-ZVT4-0626-SM-5E45T 6.4
GTEX-13FLV-0326-SM-5N9DJ 6.3
GTEX-X4XY-1626-SM-46MVN 6.2
GTEX-RU72-1426-SM-46MUF 6.1
GTEX-U3ZN-0226-SM-3DB8D 6.0
GTEX-RM2N-1926-SM-48FCU 5.9
GTEX-ZVT3-1626-SM-5GU66 5.8
GTEX-14AS3-0126-SM-5Q5F4 5.5
GTEX-131YS-1626-SM-5HL6C 5.4
GTEX-14DAQ-1726-SM-5S2R2 5.4
GTEX-R53T-0326-SM-48FEC 5.4
GTEX-13NYB-1026-SM-5IFH3 5.3
GTEX-WQUQ-1926-SM-4OOSA 5.3
GTEX-13SLX-1226-SM-5S2Q6 5.2
GTEX-XOTO-0826-SM-4B65O 5.2
GTEX-147JS-1126-SM-5RQIW 5.1
GTEX-1399T-0826-SM-5IFES 5.0
GTEX-RNOR-1426-SM-48FDJ 5.0
GTEX-12WSL-0226-SM-5CVMJ 4.9
GTEX-13NZB-0626-SM-5IFH6 4.9
GTEX-ZZPU-0426-SM-5GZYH 4.9
GTEX-12WSM-0726-SM-5GCOW 4.8
GTEX-RTLS-1326-SM-46MUN 4.8
GTEX-13N2G-0926-SM-5IFGJ 4.7
GTEX-12696-0826-SM-5EGGE 4.6
GTEX-13OW6-2626-SM-5IFF2 4.4
GTEX-X4EO-1126-SM-4QARQ 4.4
GTEX-139TS-1426-SM-5IFJD 4.3
GTEX-1212Z-0226-SM-59HLF 4.2
GTEX-132NY-0926-SM-5P9G3 4.1
GTEX-YECK-1926-SM-4W21H 4.1
GTEX-11ZTS-1426-SM-5EQMM 4.0
GTEX-YEC4-0826-SM-5P9FV 4.0
GTEX-YFC4-1526-SM-5IFJS 4.0
GTEX-13PVR-0126-SM-5S2PY 3.9
GTEX-145LU-1326-SM-5LU9N 3.8
GTEX-11NUK-1226-SM-5P9GM 3.7
GTEX-12ZZZ-1326-SM-59HKW 3.7
GTEX-145MO-2326-SM-5NQ9K 3.7
GTEX-RN64-1826-SM-48FDV 3.7
GTEX-Y5V5-0926-SM-4VBPZ 3.7
GTEX-14E1K-0326-SM-5S2PE 3.3
GTEX-SJXC-1226-SM-4DM78 3.3
GTEX-WZTO-0626-SM-4PQYY 3.3
GTEX-11NV4-1326-SM-5HL6V 3.2
GTEX-145MF-0826-SM-5QGQA 3.2
GTEX-11OF3-0726-SM-5BC4Z 3.1
GTEX-13112-1426-SM-5EGH8 3.1
GTEX-131XH-0626-SM-5LZWH 3.1
GTEX-11ZVC-0726-SM-5FQT9 3.0
GTEX-14A5I-1726-SM-5QGQ5 3.0
GTEX-ZYT6-0626-SM-5E45V 2.8
GTEX-11ZUS-2526-SM-59872 2.7
GTEX-11DXY-0526-SM-5EGGQ 2.5
GTEX-13O3O-1826-SM-5IFGW 2.4
GTEX-13VXU-0926-SM-5IFFH 2.3
GTEX-14753-1626-SM-5NQ9L 2.3
GTEX-QEG4-1826-SM-4R1JN 2.1
GTEX-13FTZ-0726-SM-5IFFY 2.0
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

44.5

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 44.5
FF:10018-101C9 64,69,70 years, mixed 44.5

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