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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:194.7TPM
GTEx:114.6RPKM
FANTOM5:428.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA029501

 

Antibody CAB019421

 

Glandular cells

Low   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

194.7

overview Male, age 65
Sample 1
TPM: 143.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 233.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 199.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 202.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

114.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 114.6
Samples: 88

Max RPKM: 229.6
Min RPKM: 54.4
Std RPKM: 30.8
Median RPKM: 110.3
GTEX-131XG-1726-SM-5LZUR 229.6
GTEX-WFG8-1626-SM-4LVMB 206.9
GTEX-Y5LM-1626-SM-4VDTB 190.0
GTEX-UPK5-2026-SM-4JBIM 185.4
GTEX-XAJ8-0526-SM-47JYK 177.5
GTEX-X15G-1426-SM-4PQZK 158.0
GTEX-13FTW-2026-SM-5IJE2 155.2
GTEX-ZTPG-2626-SM-57WFX 151.8
GTEX-VUSG-1726-SM-4KKZL 151.7
GTEX-XGQ4-1326-SM-4GIDU 147.3
GTEX-ZVT2-2126-SM-5NQ93 145.7
GTEX-Z9EW-0926-SM-5CVMM 144.7
GTEX-WFJO-0926-SM-4LVM2 142.2
GTEX-ZP4G-1626-SM-57WGD 140.9
GTEX-11NSD-1726-SM-5N9C3 138.8
GTEX-ZEX8-1826-SM-57WBH 138.0
GTEX-11DXX-1626-SM-5H11H 137.9
GTEX-111CU-1326-SM-5NQ8L 137.6
GTEX-ZYWO-1526-SM-5SIAL 135.6
GTEX-133LE-1426-SM-5IFH1 135.4
GTEX-ZYFG-2026-SM-5E43Y 133.3
GTEX-XUZC-1426-SM-4BRV3 133.1
GTEX-111YS-1426-SM-5GID8 131.7
GTEX-11XUK-1426-SM-5EQMG 131.0
GTEX-YB5E-1526-SM-5IFIE 129.4
GTEX-14DAR-1426-SM-5RQIR 128.4
GTEX-11P82-0826-SM-5P9GU 127.1
GTEX-ZZ64-0526-SM-5GZXM 126.0
GTEX-ZVP2-1726-SM-5GU5P 125.3
GTEX-Y3IK-1726-SM-4YCCR 125.2
GTEX-XXEK-1026-SM-4BRUW 122.3
GTEX-14E6E-1626-SM-5RQI7 121.8
GTEX-XMK1-1826-SM-4B66F 121.6
GTEX-139YR-2226-SM-5IFFW 120.2
GTEX-145LT-1026-SM-5LU9O 118.9
GTEX-1122O-1326-SM-5H11F 116.7
GTEX-11EQ9-1326-SM-5985X 116.1
GTEX-13O61-1326-SM-5KM31 114.5
GTEX-ZLV1-1126-SM-4WWBW 113.1
GTEX-WRHK-1026-SM-4MVOD 113.0
GTEX-1192X-2526-SM-59868 112.3
GTEX-131XF-1326-SM-5GCMQ 111.6
GTEX-13CF3-1226-SM-5LZXN 111.0
GTEX-11VI4-1626-SM-5EQKO 110.8
GTEX-ZF2S-1726-SM-57WFT 109.8
GTEX-WQUQ-2426-SM-4MVNW 108.5
GTEX-117YX-0326-SM-5GICL 108.3
GTEX-1399R-2026-SM-5K7WN 107.6
GTEX-13113-1226-SM-5EGHT 106.6
GTEX-1399U-2126-SM-5IFEZ 106.5
GTEX-ZA64-1226-SM-5HL7B 106.3
GTEX-13RTK-0826-SM-5Q5C6 105.5
GTEX-WH7G-1626-SM-4LVMY 104.6
GTEX-1399S-2026-SM-5KM4B 102.3
GTEX-ZTX8-0526-SM-59HLD 102.2
GTEX-11DXZ-1326-SM-5H11X 102.1
GTEX-ZXES-1526-SM-5NQ95 101.1
GTEX-13111-1426-SM-5DUW3 99.6
GTEX-11I78-1126-SM-5A5K5 96.9
GTEX-X5EB-1626-SM-4E3IV 96.7
GTEX-ZPIC-2326-SM-57WDW 96.6
GTEX-XBED-1426-SM-4AT4G 96.4
GTEX-ZQG8-2526-SM-57WEQ 94.8
GTEX-Y9LG-1626-SM-5IFHM 93.3
GTEX-13FH7-1226-SM-5IJFK 92.5
GTEX-12BJ1-1926-SM-5HL9Z 92.4
GTEX-WEY5-1526-SM-4LMJF 91.9
GTEX-Y114-1426-SM-4TT6W 91.3
GTEX-13D11-0726-SM-5LZZB 90.6
GTEX-139T6-1026-SM-5IJGC 89.6
GTEX-ZC5H-2326-SM-4WAYT 89.1
GTEX-11P7K-1626-SM-5GU63 88.7
GTEX-13QBU-1926-SM-5IJEW 87.7
GTEX-VJYA-0926-SM-4KL1N 87.2
GTEX-WFG7-1726-SM-4LVME 85.8
GTEX-145ME-0926-SM-5O9AR 85.8
GTEX-13PL7-2626-SM-5IFH4 84.5
GTEX-ZPCL-1726-SM-57WEO 82.1
GTEX-ZTSS-0926-SM-59865 81.9
GTEX-ZVZP-1826-SM-5GZXB 81.2
GTEX-13O21-1026-SM-5IJDU 80.4
GTEX-12WSK-1526-SM-5CVNO 79.0
GTEX-ZQUD-0926-SM-57WE3 78.7
GTEX-ZLFU-1526-SM-4WWBT 78.1
GTEX-YF7O-1826-SM-5IFIU 70.7
GTEX-YEC4-1726-SM-4W21E 69.1
GTEX-13OVI-1926-SM-5IJCG 61.0
GTEX-148VJ-2226-SM-5NQ9M 54.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

428.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 428.9
FF:10024-101D6 15,40,85 years, mixed 428.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.