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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.4TPM
GTEx:5.8RPKM
FANTOM5:102.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA056003

  

Adipocytes

 Not detected  

Chondrocytes

 Low  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA056003

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

15.4
N/A Female, age 80
Sample 1
TPM: 16.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 22.4
N/A Female, age 57
Sample 3
TPM: 22.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 9.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 6.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

5.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 5.4
Samples: 350

Max RPKM: 52.7
Min RPKM: 0.7
Std RPKM: 5.3
Median RPKM: 4
GTEX-13112-2726-SM-5DUW5 52.7
GTEX-YB5E-2126-SM-5IFI7 46.0
GTEX-ZQG8-1526-SM-5HL65 30.5
GTEX-13OW6-0526-SM-5L3HY 28.4
GTEX-13VXT-0226-SM-5LU9Q 27.8
GTEX-11ZTT-2526-SM-5EQM9 21.7
GTEX-11P82-1726-SM-5Q5AT 20.3
GTEX-WY7C-2426-SM-3NB2V 18.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 6.5
Samples: 227

Max RPKM: 38.5
Min RPKM: 1.1
Std RPKM: 4.7
Median RPKM: 5.4
GTEX-13VXT-0926-SM-5LU5K 38.5
GTEX-ZYFG-1426-SM-5GICS 30.9
GTEX-ZDTT-0526-SM-5HL4M 21.8
GTEX-13O21-3126-SM-5J1OI 19.7
GTEX-13OW7-1126-SM-5K7V6 18.4
GTEX-ZP4G-1326-SM-5EGIW 17.7
GTEX-1122O-0926-SM-5N9C9 16.6
GTEX-11DXX-2026-SM-5EGJL 16.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

102.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 102.3
FF:10010-101C1 65,65,76 years, mixed 102.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.