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PABPC1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:38.8RPKM
FANTOM5:394.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA045423

 

Antibody CAB011536

 

Glial cells

Not detected   Low  

Neuronal cells

Medium   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

38.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 38.8
Samples: 117

Max RPKM: 90.7
Min RPKM: 11.9
Std RPKM: 12.7
Median RPKM: 38.2
GTEX-XMD1-0011-R5A-SM-4AT47 90.7
GTEX-13JUV-0011-R5a-SM-5LZY5 68.3
GTEX-QVJO-0011-R5A-SM-2S1QM 66.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 64.8
GTEX-132Q8-0011-R5a-SM-5IJDM 63.2
GTEX-X585-0011-R5A-SM-46MVI 62.9
GTEX-P44H-0011-R5A-SM-2XCEX 58.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 58.0
GTEX-UTHO-0011-R5A-SM-3GIJD 57.9
GTEX-N7MT-0011-R5a-SM-2I3G6 57.8
GTEX-11H98-0011-R5b-SM-57WCF 54.3
GTEX-OHPN-0011-R5A-SM-2I5FF 54.2
GTEX-R55E-0011-R5A-SM-2TC5N 51.9
GTEX-12WSF-0011-R5a-SM-5HL8K 51.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 50.9
GTEX-144GO-0011-R5a-SM-5PNUR 50.8
GTEX-13X6I-0011-R5a-SM-5PNWW 50.5
GTEX-X4XX-0011-R5A-SM-46MWN 50.5
GTEX-12WSA-0011-R5b-SM-5GU5I 49.9
GTEX-14BIM-0011-R5b-SM-5S2RM 49.3
GTEX-WWYW-0011-R5A-SM-3NB3E 49.2
GTEX-11OF3-0011-R5a-SM-57WB4 48.6
GTEX-T2IS-0011-R5A-SM-32QP4 48.6
GTEX-T5JC-0011-R5A-SM-32PLK 48.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 48.0
GTEX-QMR6-0011-R5A-SM-32PKT 47.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 47.6
GTEX-131YS-0011-R5b-SM-5K7YB 47.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 46.8
GTEX-145MH-0011-R5a-SM-5P9JT 46.8
GTEX-13G51-0011-R5a-SM-5L3EB 46.7
GTEX-N7MS-0011-R5a-SM-2HMK8 46.7
GTEX-NL4W-0011-R5a-SM-2I3GD 46.7
GTEX-RU72-0011-R5A-SM-2TF6U 46.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 46.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 45.5
GTEX-13NYS-0011-R5a-SM-5MR4D 45.3
GTEX-Z93S-0011-R5b-SM-4RGNI 45.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 44.7
GTEX-NL3H-0011-R5a-SM-2I3GB 44.6
GTEX-12WSC-0011-R5b-SM-5CVNS 44.5
GTEX-1313W-0011-R5b-SM-5L3EP 43.5
GTEX-T6MN-0011-R5A-SM-32QPD 43.4
GTEX-1399T-0011-R5b-SM-5IJDK 43.0
GTEX-PVOW-0011-R5A-SM-32PL7 42.4
GTEX-RVPV-0011-R5A-SM-2TF69 41.4
GTEX-NPJ7-0011-R5a-SM-33HBK 40.9
GTEX-OXRN-0011-R5A-SM-2I5EF 40.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 40.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 40.3
GTEX-RVPU-0011-R5A-SM-2XCAD 40.3
GTEX-13X6K-0011-R5b-SM-5PNUE 40.2
GTEX-11GSP-0011-R5a-SM-57WBE 39.4
GTEX-WL46-0011-R5A-SM-3LK6V 39.4
GTEX-S7SE-0011-R5A-SM-2XCDA 39.3
GTEX-13O3O-0011-R5b-SM-5KM44 39.0
GTEX-14ABY-0011-R5b-SM-5SI7B 39.0
GTEX-13FLW-0011-R5a-SM-5LZX6 38.9
GTEX-145LS-0011-R5a-SM-5SI65 38.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 38.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 38.0
GTEX-TSE9-0011-R5A-SM-3DB7J 37.6
GTEX-13OW5-0011-R5b-SM-5L3FR 37.5
GTEX-13OW6-0011-R5a-SM-5O9BK 37.5
GTEX-12WSB-0011-R5b-SM-5GU67 37.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 37.0
GTEX-WVLH-0011-R5A-SM-3MJFW 36.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 35.2
GTEX-13X6J-0011-R5b-SM-5PNWT 35.0
GTEX-13VXU-0011-R5a-SM-5O9D7 34.5
GTEX-13CZV-0011-R5a-SM-5K7XA 34.4
GTEX-12WSD-0011-R5b-SM-5CVNG 34.2
GTEX-13S7M-0011-R5b-SM-5P9HS 33.9
GTEX-11NV4-0011-R5a-SM-5NQ88 33.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 33.8
GTEX-ZUA1-0011-R5b-SM-51MTG 33.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 33.5
GTEX-139TT-0011-R5b-SM-5K7W8 32.5
GTEX-11WQC-0011-R5a-SM-5BC74 32.2
GTEX-WZTO-0011-R5B-SM-3NMC5 32.2
GTEX-13SLX-0011-R5a-SM-5O9BV 31.6
GTEX-13FXS-0011-R5b-SM-5LZYE 31.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 30.4
GTEX-139TS-0011-R5b-SM-5J2MZ 30.2
GTEX-ZE7O-0011-R5a-SM-57WBO 29.9
GTEX-ZXG5-0011-R5b-SM-57WBN 29.9
GTEX-13NYB-0011-R5a-SM-5MR45 29.8
GTEX-12WSH-0011-R5b-SM-5P9F3 29.4
GTEX-X261-0011-R5A-SM-3NMB4 29.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 28.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 28.5
GTEX-13OVH-0011-R5b-SM-5KM4L 28.2
GTEX-13OVL-0011-R5b-SM-5L3FU 28.2
GTEX-13FLV-0011-R5a-SM-5LZWT 27.9
GTEX-13JVG-0011-R5a-SM-5MR4O 27.6
GTEX-12ZZX-0011-R5a-SM-5HL89 27.3
GTEX-YFC4-0011-R5a-SM-4RGLR 27.2
GTEX-1445S-0011-R5a-SM-5PNUS 26.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 26.2
GTEX-13OW7-0011-R5b-SM-5O9DM 26.0
GTEX-139T8-0011-R5b-SM-5J1MO 24.8
GTEX-1477Z-0011-R5b-SM-5PNUO 24.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 23.9
GTEX-13FHP-0011-R5b-SM-5LZY2 22.7
GTEX-XOTO-0011-R5A-SM-4B657 22.3
GTEX-ZVT3-0011-R5a-SM-51MSI 22.2
GTEX-S7PM-0011-R5A-SM-3NM8G 21.8
GTEX-11UD1-0011-R5b-SM-5P9FP 21.5
GTEX-13CIG-0011-R5b-SM-5L3F2 21.1
GTEX-14BIN-0011-R5b-SM-5SI78 21.1
GTEX-ZV68-0011-R5a-SM-4YCDW 20.8
GTEX-YJ89-0011-R5a-SM-4V6GM 20.7
GTEX-144GL-0011-R5b-SM-5PNUJ 19.9
GTEX-13112-0011-R5b-SM-5DUV8 19.1
GTEX-13CF2-0011-R5a-SM-5LZWS 18.0
GTEX-13NZA-0011-R5b-SM-5KM4K 13.9
GTEX-145MG-0011-R5b-SM-5S2VU 11.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

394.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 394.5
FF:10164-103B2 76 years, female 481.8
FF:10379-105H1 89 years, female 307.1

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