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PABPC1
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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:601.0TPM
GTEx:165.9RPKM
FANTOM5:1456.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA045423

 

Antibody CAB011536

 

Glandular cells

Medium   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

601.0

overview Male, age 65
Sample 1
TPM: 720.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 529.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 602.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 551.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

165.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 165.9
Samples: 88

Max RPKM: 294.6
Min RPKM: 60.7
Std RPKM: 45.8
Median RPKM: 161.1
GTEX-131XG-1726-SM-5LZUR 294.6
GTEX-148VJ-2226-SM-5NQ9M 287.0
GTEX-11P82-0826-SM-5P9GU 264.3
GTEX-1399U-2126-SM-5IFEZ 249.6
GTEX-13O61-1326-SM-5KM31 247.1
GTEX-11VI4-1626-SM-5EQKO 246.2
GTEX-WRHK-1026-SM-4MVOD 244.0
GTEX-145ME-0926-SM-5O9AR 238.2
GTEX-11XUK-1426-SM-5EQMG 237.7
GTEX-13FH7-1226-SM-5IJFK 222.7
GTEX-ZLFU-1526-SM-4WWBT 218.1
GTEX-139YR-2226-SM-5IFFW 216.1
GTEX-13QBU-1926-SM-5IJEW 214.2
GTEX-WFG8-1626-SM-4LVMB 210.0
GTEX-UPK5-2026-SM-4JBIM 208.5
GTEX-13113-1226-SM-5EGHT 202.0
GTEX-139T6-1026-SM-5IJGC 197.6
GTEX-VUSG-1726-SM-4KKZL 196.7
GTEX-13RTK-0826-SM-5Q5C6 196.6
GTEX-11NSD-1726-SM-5N9C3 195.8
GTEX-ZQG8-2526-SM-57WEQ 195.3
GTEX-ZVP2-1726-SM-5GU5P 194.3
GTEX-12BJ1-1926-SM-5HL9Z 193.8
GTEX-12WSK-1526-SM-5CVNO 192.6
GTEX-1192X-2526-SM-59868 192.4
GTEX-WH7G-1626-SM-4LVMY 192.4
GTEX-Y5LM-1626-SM-4VDTB 191.7
GTEX-WFJO-0926-SM-4LVM2 189.9
GTEX-VJYA-0926-SM-4KL1N 187.5
GTEX-ZP4G-1626-SM-57WGD 187.1
GTEX-X15G-1426-SM-4PQZK 185.0
GTEX-ZXES-1526-SM-5NQ95 179.6
GTEX-ZTPG-2626-SM-57WFX 177.3
GTEX-Z9EW-0926-SM-5CVMM 176.6
GTEX-ZC5H-2326-SM-4WAYT 176.1
GTEX-XGQ4-1326-SM-4GIDU 173.0
GTEX-13O21-1026-SM-5IJDU 172.0
GTEX-ZQUD-0926-SM-57WE3 171.3
GTEX-WFG7-1726-SM-4LVME 171.1
GTEX-145LT-1026-SM-5LU9O 169.2
GTEX-11P7K-1626-SM-5GU63 166.6
GTEX-ZYWO-1526-SM-5SIAL 165.1
GTEX-14E6E-1626-SM-5RQI7 164.7
GTEX-111CU-1326-SM-5NQ8L 164.0
GTEX-XBED-1426-SM-4AT4G 158.3
GTEX-1399R-2026-SM-5K7WN 157.9
GTEX-ZVT2-2126-SM-5NQ93 156.8
GTEX-13CF3-1226-SM-5LZXN 155.9
GTEX-ZZ64-0526-SM-5GZXM 155.5
GTEX-131XF-1326-SM-5GCMQ 155.3
GTEX-ZEX8-1826-SM-57WBH 154.5
GTEX-13OVI-1926-SM-5IJCG 154.1
GTEX-11DXZ-1326-SM-5H11X 150.2
GTEX-11EQ9-1326-SM-5985X 150.0
GTEX-13111-1426-SM-5DUW3 147.7
GTEX-1399S-2026-SM-5KM4B 144.6
GTEX-133LE-1426-SM-5IFH1 143.3
GTEX-ZA64-1226-SM-5HL7B 141.2
GTEX-117YX-0326-SM-5GICL 140.8
GTEX-ZYFG-2026-SM-5E43Y 140.5
GTEX-ZPIC-2326-SM-57WDW 139.3
GTEX-WEY5-1526-SM-4LMJF 138.4
GTEX-ZF2S-1726-SM-57WFT 137.7
GTEX-Y114-1426-SM-4TT6W 136.5
GTEX-YB5E-1526-SM-5IFIE 133.2
GTEX-Y3IK-1726-SM-4YCCR 133.2
GTEX-13PL7-2626-SM-5IFH4 132.7
GTEX-ZTX8-0526-SM-59HLD 128.0
GTEX-XXEK-1026-SM-4BRUW 126.9
GTEX-XUZC-1426-SM-4BRV3 126.9
GTEX-XMK1-1826-SM-4B66F 126.3
GTEX-13D11-0726-SM-5LZZB 125.5
GTEX-XAJ8-0526-SM-47JYK 123.7
GTEX-11I78-1126-SM-5A5K5 123.6
GTEX-14DAR-1426-SM-5RQIR 122.6
GTEX-ZLV1-1126-SM-4WWBW 118.0
GTEX-13FTW-2026-SM-5IJE2 117.3
GTEX-11DXX-1626-SM-5H11H 111.3
GTEX-X5EB-1626-SM-4E3IV 109.9
GTEX-YEC4-1726-SM-4W21E 108.4
GTEX-Y9LG-1626-SM-5IFHM 106.9
GTEX-ZTSS-0926-SM-59865 102.5
GTEX-1122O-1326-SM-5H11F 100.0
GTEX-YF7O-1826-SM-5IFIU 98.2
GTEX-WQUQ-2426-SM-4MVNW 97.7
GTEX-ZVZP-1826-SM-5GZXB 96.7
GTEX-ZPCL-1726-SM-57WEO 96.5
GTEX-111YS-1426-SM-5GID8 60.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1456.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1456.4
FF:10024-101D6 15,40,85 years, mixed 1456.4

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