We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SLC12A3
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:109.3TPM
GTEx:44.4RPKM
FANTOM5:196.7Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:Medium
 

Antibody staining

Antibody HPA028748

 

Cells in glomeruli

Not detected  

Cells in tubules

Medium  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

109.3

overview Female, age 58
Sample 1
TPM: 218.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 109.4
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 117.6
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 158.0
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 41.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 57.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 76.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 127.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 76.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

44.4

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 44.4
Samples: 32

Max RPKM: 161.9
Min RPKM: 0.2
Std RPKM: 42.3
Median RPKM: 32.2
GTEX-11OF3-1326-SM-5N9FJ 161.9
GTEX-11GS4-2326-SM-5A5KS 146.4
GTEX-Y5V6-2026-SM-5IFHO 105.3
GTEX-12WSG-0826-SM-5EQ5A 103.7
GTEX-P4QS-1126-SM-3NMD5 97.2
GTEX-13OW6-1826-SM-5N9F9 90.2
GTEX-ZC5H-1726-SM-5HL7X 82.2
GTEX-13NYB-1726-SM-5N9G2 72.1
GTEX-QLQW-1626-SM-4R1K1 60.4
GTEX-145MN-0326-SM-5QGQI 56.3
GTEX-N7MS-1626-SM-3LK5F 52.3
GTEX-T5JC-1526-SM-4DM68 50.6
GTEX-1399S-0526-SM-5IJG8 39.5
GTEX-13RTJ-2226-SM-5S2Q1 34.5
GTEX-1497J-0826-SM-5NQAJ 34.5
GTEX-147F4-2626-SM-5Q5CS 32.7
GTEX-13OVI-1126-SM-5KLZF 31.6
GTEX-ZYFD-1526-SM-5NQ7T 31.3
GTEX-ZVZP-0926-SM-5GIDB 29.3
GTEX-XPVG-0526-SM-4B65N 22.0
GTEX-UPIC-1126-SM-4IHLO 20.8
GTEX-13OVL-1826-SM-5KLZR 13.3
GTEX-QDVN-1626-SM-48TZC 10.8
GTEX-ZYFG-1626-SM-5GZYY 10.6
GTEX-RN64-1626-SM-48FD7 8.4
GTEX-13112-2126-SM-5GCO4 7.6
GTEX-11TTK-1926-SM-5PNW8 6.0
GTEX-ZLFU-0926-SM-5P9F8 4.7
GTEX-13O1R-2526-SM-5N9FW 1.5
GTEX-NPJ8-2226-SM-3TW8D 0.7
GTEX-ZYT6-2226-SM-5GIC9 0.7
GTEX-12696-0926-SM-5FQTV 0.2
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

196.7

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 196.7
FF:10017-101C8 60,62,63 years, female 196.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.