We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RDH11
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:35.2TPM
GTEx:16.0RPKM
FANTOM5:39.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody CAB046011

 

Adipocytes

Not detected  

Glandular cells

Not detected  

Myoepithelial cells

Not detected  
 
 
 

BREAST - HPA RNA-seq

Average TPM

35.2

overview Female, age 52
Sample 1
TPM: 30.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 31.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 36.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 42.1
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

16.0

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 16.0
Samples: 214

Max RPKM: 74.3
Min RPKM: 6.7
Std RPKM: 5.6
Median RPKM: 15
GTEX-11NSD-0926-SM-5N9DR 74.3
GTEX-XUZC-1626-SM-4BRVP 33.1
GTEX-R55F-1726-SM-2TF4R 27.5
GTEX-14ABY-2126-SM-5QGQZ 26.8
GTEX-ZTTD-1026-SM-51MRD 26.4
GTEX-ZU9S-1926-SM-5NQBP 25.2
GTEX-WYBS-0926-SM-3NM94 24.4
GTEX-T5JW-2026-SM-4DM63 24.0
GTEX-13NZB-2126-SM-5MR4Y 23.7
GTEX-T5JC-2126-SM-32PMO 23.7
GTEX-11TT1-2126-SM-5GU5Y 23.2
GTEX-13NZ9-1026-SM-5MR5K 23.1
GTEX-13OW5-2226-SM-5L3HC 23.1
GTEX-145LT-0726-SM-5S2VM 23.1
GTEX-ZTX8-1226-SM-4YCE9 22.8
GTEX-ZY6K-1626-SM-5GZWV 22.6
GTEX-147F4-2826-SM-5NQBN 22.2
GTEX-VJWN-0726-SM-3GIJ8 22.2
GTEX-SE5C-2126-SM-4BRUJ 21.9
GTEX-XYKS-1326-SM-4BRUN 21.8
GTEX-VUSG-2226-SM-4KKZO 21.7
GTEX-1314G-1226-SM-5BC6D 21.6
GTEX-X4XY-0926-SM-4E3JD 21.6
GTEX-13O3P-0826-SM-5L3DH 21.4
GTEX-UPK5-2326-SM-3P5Z8 21.4
GTEX-SIU7-1626-SM-4BRUK 21.0
GTEX-QEL4-2126-SM-447AE 20.7
GTEX-T6MN-0726-SM-32PML 20.6
GTEX-QEG5-0726-SM-4R1JQ 20.2
GTEX-T2YK-2226-SM-32QPT 20.2
GTEX-13PL6-2926-SM-5L3I2 20.1
GTEX-ZWKS-2826-SM-5NQ74 20.0
GTEX-ZVTK-0326-SM-51MRR 19.9
GTEX-ZF2S-2026-SM-5E461 19.6
GTEX-13NZ8-0126-SM-5IJCT 19.5
GTEX-TMMY-0726-SM-33HBE 19.4
GTEX-146FH-0826-SM-5SI8T 19.2
GTEX-11DXW-0626-SM-5N9ER 19.0
GTEX-13N11-1726-SM-5J1OJ 19.0
GTEX-UJHI-1426-SM-3DB9C 19.0
GTEX-WXYG-2226-SM-4E3IM 18.9
GTEX-11P7K-0726-SM-5EGKX 18.8
GTEX-U3ZH-1426-SM-4DXSR 18.7
GTEX-S33H-0326-SM-4AD6N 18.6
GTEX-ZC5H-2626-SM-5J2MG 18.6
GTEX-13S86-1226-SM-5S2OA 18.3
GTEX-W5X1-2326-SM-3GIL6 18.3
GTEX-WY7C-2726-SM-3NB3P 18.3
GTEX-XV7Q-2326-SM-4BRVZ 18.2
GTEX-Y3IK-2326-SM-4WWDT 18.2
GTEX-ZVE2-1226-SM-5NQ8R 18.2
GTEX-ZYWO-2326-SM-5GZY4 18.2
GTEX-111YS-1926-SM-5GICC 18.0
GTEX-QDT8-0626-SM-48TYW 18.0
GTEX-ZVT2-1826-SM-5NQ8W 18.0
GTEX-13FHO-0826-SM-5L3E8 17.8
GTEX-131XW-0726-SM-5EGK3 17.6
GTEX-RWS6-1926-SM-47JXY 17.5
GTEX-WOFL-0826-SM-3MJG1 17.5
GTEX-YFC4-1426-SM-5IFJG 17.5
GTEX-11GS4-2126-SM-5A5KR 17.4
GTEX-12ZZX-1126-SM-5EGKB 17.2
GTEX-S341-1526-SM-4AD6K 17.2
GTEX-WYJK-1326-SM-3NB2T 17.2
GTEX-X15G-1626-SM-3NMB3 17.2
GTEX-11DZ1-0326-SM-5N9BN 17.1
GTEX-UTHO-1026-SM-3GAF7 17.1
GTEX-ZLV1-1426-SM-4WWES 17.1
GTEX-11WQC-1726-SM-5GU4W 17.0
GTEX-13W3W-1226-SM-5LU4H 17.0
GTEX-U8XE-0826-SM-4E3J1 17.0
GTEX-Y111-2026-SM-4SOJA 17.0
GTEX-ZV7C-1826-SM-5NQ83 16.9
GTEX-11EMC-2026-SM-5A5JV 16.8
GTEX-RU72-0626-SM-46MUI 16.8
GTEX-XUJ4-1926-SM-4BOOV 16.8
GTEX-11EI6-0626-SM-5985T 16.5
GTEX-11WQK-2426-SM-5GU5C 16.5
GTEX-11P81-1926-SM-5BC53 16.4
GTEX-TKQ2-1826-SM-33HB2 16.4
GTEX-X4EP-2926-SM-3P5YQ 16.4
GTEX-ZZPU-0626-SM-5E43T 16.4
GTEX-1192X-2326-SM-5987X 16.3
GTEX-11PRG-0826-SM-5EQ6A 16.3
GTEX-WYVS-1726-SM-3NMAY 16.2
GTEX-R53T-1526-SM-48FEK 16.1
GTEX-RUSQ-2026-SM-4GIAK 16.1
GTEX-TML8-1226-SM-32QON 16.1
GTEX-XBED-1626-SM-47JYN 15.9
GTEX-139T8-0826-SM-5L3DE 15.8
GTEX-XMD1-0826-SM-4AT52 15.8
GTEX-13O3O-0826-SM-5K7WE 15.7
GTEX-X261-0626-SM-3NMD9 15.7
GTEX-1313W-0826-SM-5EQ4T 15.6
GTEX-132AR-0826-SM-5EGK6 15.5
GTEX-R3RS-0626-SM-48FE1 15.5
GTEX-ZF3C-2326-SM-5S2MZ 15.5
GTEX-ZYFC-0826-SM-5E44K 15.5
GTEX-131YS-0626-SM-5EGKL 15.4
GTEX-11TUW-1826-SM-5BC5D 15.3
GTEX-139TU-0626-SM-5KM3X 15.3
GTEX-13QIC-2326-SM-5LU5N 15.3
GTEX-ZYT6-0126-SM-5E45J 15.3
GTEX-11O72-2126-SM-5N9FO 15.1
GTEX-13CF2-2026-SM-5K7VI 15.1
GTEX-Q2AG-0326-SM-48U1O 15.1
GTEX-13FTX-1126-SM-5N9EN 15.0
GTEX-14AS3-1626-SM-5S2OY 15.0
GTEX-13O3Q-2226-SM-5KM4O 14.9
GTEX-13W46-0826-SM-5LU3H 14.9
GTEX-U412-1826-SM-4DXTJ 14.9
GTEX-WFON-1826-SM-3GILG 14.9
GTEX-WI4N-1426-SM-3LK7H 14.9
GTEX-11NV4-2026-SM-5N9DG 14.8
GTEX-1399U-1826-SM-5PNZ1 14.8
GTEX-Y3I4-1526-SM-4TT7K 14.8
GTEX-YB5K-1626-SM-5IFIN 14.8
GTEX-1122O-1226-SM-5H113 14.7
GTEX-ZF29-1926-SM-5S2P1 14.7
GTEX-13FTY-2226-SM-5J1ND 14.6
GTEX-XMD2-0926-SM-4WWEF 14.6
GTEX-12WSK-2226-SM-5GCO5 14.5
GTEX-S4Q7-1126-SM-4AD6R 14.5
GTEX-U3ZN-1926-SM-4DXSG 14.5
GTEX-1211K-1926-SM-5EQLB 14.4
GTEX-XOT4-0726-SM-4GIAW 14.4
GTEX-11ZUS-0826-SM-5FQUY 14.3
GTEX-133LE-1726-SM-5K7VQ 14.3
GTEX-11ONC-2126-SM-5HL6E 14.2
GTEX-12WSN-1326-SM-5GCNT 14.2
GTEX-145MO-0826-SM-5NQBL 14.2
GTEX-Y114-2026-SM-4TT7L 14.2
GTEX-YJ8O-2226-SM-5IFHW 14.2
GTEX-144GL-2026-SM-5LU3O 14.1
GTEX-T6MO-0326-SM-32QOK 14.1
GTEX-Y8E4-1626-SM-5S2MW 14.1
GTEX-ZEX8-2226-SM-57WC6 14.1
GTEX-11I78-2226-SM-5PNYA 14.0
GTEX-12WSB-0626-SM-59HJO 14.0
GTEX-13113-1726-SM-5GCOO 14.0
GTEX-S32W-2026-SM-4AD6E 14.0
GTEX-S4P3-1326-SM-4AD6V 14.0
GTEX-ZDXO-0126-SM-5S2ND 14.0
GTEX-S7SE-0826-SM-4AT4D 13.9
GTEX-T2IS-1526-SM-32QPR 13.9
GTEX-ZPIC-1126-SM-5BC7F 13.9
GTEX-ZVZQ-0826-SM-51MRF 13.9
GTEX-XUW1-2326-SM-4BOO5 13.8
GTEX-11OF3-1926-SM-59889 13.7
GTEX-13OW8-0226-SM-5K7UP 13.7
GTEX-ZXES-0826-SM-5E43C 13.7
GTEX-1117F-2826-SM-5GZXL 13.6
GTEX-1269C-2426-SM-5FQSN 13.6
GTEX-Y5V5-2126-SM-4WWFO 13.6
GTEX-Y5V6-2126-SM-4WWFX 13.5
GTEX-12WSM-1726-SM-5BC6J 13.4
GTEX-WRHU-0326-SM-3MJFY 13.4
GTEX-ZV6S-1826-SM-5NQ8D 13.4
GTEX-XQ3S-1326-SM-4BOPQ 13.3
GTEX-11EQ9-1826-SM-5Q5AJ 13.1
GTEX-145MN-1926-SM-5SIAI 13.1
GTEX-ZDTT-2126-SM-5S2OJ 13.1
GTEX-132NY-0826-SM-5K7Y7 12.8
GTEX-13CF3-2126-SM-5IFJP 12.8
GTEX-13D11-1026-SM-5IJFB 12.8
GTEX-13FTW-1426-SM-5LZWZ 12.8
GTEX-S4UY-0726-SM-4AD6X 12.8
GTEX-TKQ1-0226-SM-33HB5 12.8
GTEX-Y8LW-1626-SM-5IFHX 12.8
GTEX-11EM3-1326-SM-5N9C6 12.7
GTEX-ZUA1-1526-SM-59HLS 12.7
GTEX-YFCO-1826-SM-4W1YH 12.6
GTEX-Y5LM-1726-SM-4VDSX 12.4
GTEX-ZAB4-2526-SM-5HL8M 12.4
GTEX-14E6E-1326-SM-5S2NR 12.2
GTEX-PSDG-1626-SM-48TCQ 12.2
GTEX-QVJO-1826-SM-447C9 12.2
GTEX-ZAJG-0626-SM-5HL8X 12.1
GTEX-11DXY-2326-SM-5GICW 11.9
GTEX-11DXZ-1926-SM-5GZZL 11.8
GTEX-ZDYS-1126-SM-5K7UB 11.8
GTEX-11LCK-2426-SM-5HL5F 11.7
GTEX-YEC3-1026-SM-5IFI5 11.7
GTEX-R55D-0826-SM-48FEA 11.6
GTEX-117YX-1426-SM-5H12H 11.5
GTEX-REY6-2426-SM-48FF5 11.3
GTEX-ZQG8-0726-SM-5P9H9 11.3
GTEX-XGQ4-0926-SM-4AT4U 11.2
GTEX-144GM-0926-SM-5O994 11.1
GTEX-QMRM-1626-SM-4R1KV 11.1
GTEX-XQ8I-2426-SM-4WAXY 11.1
GTEX-11ZTT-2326-SM-5EQLG 10.8
GTEX-ZT9W-2026-SM-51MRA 10.8
GTEX-ZZ64-1226-SM-5E43R 10.8
GTEX-11GSO-1926-SM-5A5K3 10.7
GTEX-14753-2426-SM-5LU8U 10.7
GTEX-145ME-1526-SM-5Q5F2 10.6
GTEX-ZVT4-1026-SM-57WC4 10.6
GTEX-ZA64-1526-SM-5CVMD 10.5
GTEX-ZYW4-0826-SM-5GIDG 10.5
GTEX-139T6-1626-SM-5PNYZ 10.4
GTEX-13O61-1826-SM-5KM4I 10.3
GTEX-ZQUD-1926-SM-51MSA 10.3
GTEX-ZLFU-2126-SM-4WWEV 10.1
GTEX-12KS4-0126-SM-5Q5A5 9.8
GTEX-YB5E-1726-SM-5IFJ3 9.8
GTEX-117XS-1926-SM-5GICO 9.3
GTEX-Y9LG-1426-SM-5IFJZ 9.1
GTEX-12BJ1-1826-SM-5HL9N 8.6
GTEX-132Q8-1426-SM-5EGK7 8.6
GTEX-13N1W-0626-SM-5MR4U 8.6
GTEX-11P82-1326-SM-5HL62 7.4
GTEX-XMK1-1126-SM-4IHJ8 7.4
GTEX-13PVQ-1026-SM-5KM3M 6.7
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

39.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 39.7
FF:10080-102A8 77 years, female 39.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.