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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:34.9TPM
GTEx:15.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA043343

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Low  

Neuropil

Not detected  
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

34.9

N/A Male, age 5
Sample 1
TPM: 46.7
overview Female, age 40
Sample 2
TPM: 33.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 24.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

15.0

GTEx sample id

RPKM

12.816.621.16.033.305101520253035404550
 
12.816.621.16.033.305101520253035404550

Brain - Cortex

Brain - Cortex
RPKM: 18.0
Samples: 114

Max RPKM: 51.4
Min RPKM: 6
Std RPKM: 7.4
Median RPKM: 16.7
GTEX-13G51-3026-SM-5IJB8 51.4
GTEX-11GS4-3126-SM-5A5LH 40.8
GTEX-11ONC-2926-SM-5P9JM 33.3
GTEX-11GSP-3226-SM-5986O 32.5
GTEX-ZZPT-3026-SM-5GZXH 31.8
GTEX-X585-3026-SM-46MWF 31.7
GTEX-13OW8-2826-SM-5L3GC 30.8
GTEX-XOTO-3026-SM-4B65M 30.7
GTEX-12ZZY-3026-SM-5GCOU 30.5
GTEX-12WSA-2926-SM-5EQ4D 29.9
GTEX-N7MT-1126-SM-5SI7V 29.8
GTEX-12WSD-3126-SM-5HL7P 29.4
GTEX-XLM4-3026-SM-4AT6L 28.3
GTEX-1192X-3126-SM-5N9BY 27.9
GTEX-13S7M-3126-SM-5RQJQ 26.2
GTEX-13PVQ-3026-SM-5SI93 25.7
GTEX-13OW7-3026-SM-5L3GY 25.4
GTEX-13OVH-3026-SM-5MR4N 25.1
GTEX-WHSE-3026-SM-3P5ZH 25.0
GTEX-13OVJ-2826-SM-5L3GW 24.6
GTEX-ZVT3-3026-SM-5E43N 24.4
GTEX-1399T-3026-SM-5KLZC 23.7
GTEX-QVUS-2826-SM-3GADB 23.3
GTEX-13FHP-3026-SM-5IJBS 23.1
GTEX-1445S-3026-SM-5O9BR 22.8
GTEX-13QIC-2926-SM-5J2NF 22.5
GTEX-13X6K-2926-SM-5Q5D5 21.3
GTEX-13O3O-3126-SM-5KM3H 21.2
GTEX-13NYB-3026-SM-5IJD7 21.1
GTEX-1313W-3126-SM-5LZUI 21.0
GTEX-13FHO-3026-SM-5J1O9 20.7
GTEX-11GSO-2926-SM-5HL73 20.4
GTEX-14BMV-3026-SM-5S2PQ 20.3
GTEX-13JVG-3126-SM-5L3FH 20.2
GTEX-13JUV-2926-SM-5LZX7 19.8
GTEX-131XW-3126-SM-5LZUC 19.7
GTEX-1128S-2726-SM-5H12C 19.6
GTEX-Y111-2726-SM-4TT3N 19.5
GTEX-145MG-3026-SM-5RQJA 19.4
GTEX-13OW6-3026-SM-5J2MI 19.3
GTEX-11TTK-2926-SM-5PNYP 18.9
GTEX-11DXY-3226-SM-5GIDE 18.7
GTEX-12ZZZ-3026-SM-5BC67 18.7
GTEX-11OC5-0726-SM-5P9JK 18.5
GTEX-RU72-3026-SM-5SI7Y 18.4
GTEX-13FLW-1426-SM-5K7YE 18.1
GTEX-145MF-2726-SM-5O995 18.1
GTEX-ZE7O-3126-SM-5HL5X 18.1
GTEX-145LS-3126-SM-5Q5BY 18.0
GTEX-YFC4-3126-SM-5PNV6 18.0
GTEX-11EI6-3026-SM-5GZZO 17.6
GTEX-111FC-3126-SM-5GZZ2 17.5
GTEX-11EMC-3226-SM-5EGKW 17.4
GTEX-117XS-3026-SM-5N9CA 16.8
GTEX-14ASI-3026-SM-5S2PN 16.8
GTEX-R55F-1326-SM-5S2V4 16.8
GTEX-11NUK-2926-SM-5A5MD 16.7
GTEX-11DXW-1126-SM-5H12Q 16.6
GTEX-14A5I-2926-SM-5Q5CQ 16.5
GTEX-1117F-3226-SM-5N9CT 16.4
GTEX-144GL-3026-SM-5Q5CW 16.3
GTEX-12ZZW-2926-SM-5LZUP 16.2
GTEX-11WQK-3026-SM-5EQL6 15.8
GTEX-13X6J-3026-SM-5Q5CU 15.2
GTEX-T6MN-2626-SM-32PMQ 15.1
GTEX-147GR-3026-SM-5S2ML 15.0
GTEX-WL46-2926-SM-3LK82 14.5
GTEX-X4XX-3026-SM-3NMB2 14.5
GTEX-PWO3-0926-SM-2I5EY 14.4
GTEX-13NYS-3126-SM-5KLYV 14.3
GTEX-Q2AG-2926-SM-2HMJ3 14.2
GTEX-ZAJG-3126-SM-5HL9J 14.2
GTEX-144FL-3026-SM-5O99C 14.0
GTEX-OXRN-2426-SM-2I5EQ 14.0
GTEX-ZAK1-3026-SM-5S2MJ 14.0
GTEX-132Q8-3026-SM-5PNVG 13.8
GTEX-13PL6-3126-SM-5LUAR 13.8
GTEX-ZYFD-3026-SM-5E44C 13.8
GTEX-13NYC-2826-SM-5K7WR 13.5
GTEX-11O72-2926-SM-5BC4V 13.2
GTEX-WZTO-2926-SM-3NM9I 13.1
GTEX-13SLX-3126-SM-5S2Q5 13.0
GTEX-QDT8-2926-SM-32PKC 13.0
GTEX-13O3Q-2926-SM-5KM45 12.9
GTEX-13VXU-2926-SM-5LU5C 12.9
GTEX-ZUA1-3026-SM-59HJC 12.8
GTEX-11PRG-2926-SM-5987A 12.7
GTEX-QVJO-1426-SM-2S1QY 12.6
GTEX-Y8DK-0826-SM-4TT3T 12.6
GTEX-11NV4-2126-SM-5N9DS 12.4
GTEX-TSE9-3026-SM-3DB76 12.3
GTEX-131YS-3126-SM-5KLYT 12.2
GTEX-13FXS-3126-SM-5J2NN 12.2
GTEX-T5JC-2426-SM-3NMDB 12.2
GTEX-YJ89-3026-SM-5IFJI 12.0
GTEX-12WSC-3026-SM-5GCNF 11.9
GTEX-145MH-3026-SM-5Q5DZ 11.8
GTEX-12ZZX-2926-SM-5GCOQ 11.7
GTEX-QMR6-1426-SM-32PLA 11.5
GTEX-11ZUS-2926-SM-5FQSL 11.4
GTEX-11OF3-2926-SM-5HL78 11.3
GTEX-RNOR-2326-SM-2TF4I 11.2
GTEX-12126-1026-SM-5P9JJ 10.7
GTEX-WVLH-3026-SM-3MJG9 10.6
GTEX-NPJ8-1526-SM-2D7VU 10.5
GTEX-139T8-1026-SM-5J2MC 9.2
GTEX-NPJ7-2726-SM-2I3FT 9.2
GTEX-13IVO-2926-SM-5L3CZ 8.8
GTEX-UTHO-3026-SM-3GAFB 8.7
GTEX-WWYW-3126-SM-3NB39 8.1
GTEX-12WSH-3026-SM-5CVNI 7.8
GTEX-Z93S-2926-SM-57WB9 6.6
GTEX-T2IS-3026-SM-32QPM 6.1
GTEX-PVOW-2526-SM-2XCF7 6.0
Show all
8.410.914.73.522.9024681012141618202224262830
 
8.410.914.73.522.9024681012141618202224262830

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 12.0
Samples: 108

Max RPKM: 30.7
Min RPKM: 3.5
Std RPKM: 5.2
Median RPKM: 10.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 30.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 26.2
GTEX-13X6K-0011-R10a-SM-5P9JR 22.9
GTEX-XLM4-0011-R10A-SM-4AT5P 22.7
GTEX-13SLW-0011-R10a-SM-5S2UI 22.6
GTEX-13OW8-0011-R10a-SM-5L3H6 22.0
GTEX-12WSA-0011-R10b-SM-5P9ET 21.9
GTEX-1445S-0011-R10a-SM-5PNWB 21.7
GTEX-13N1W-0011-R10b-SM-5MR4H 21.5
GTEX-13OVL-0011-R10a-SM-5L3GS 21.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 20.0
GTEX-1477Z-0011-R10b-SM-5S2RF 19.8
GTEX-13CZV-0011-R10b-SM-5LZYD 19.0
GTEX-14753-0011-R10b-SM-5S2WE 18.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 17.9
GTEX-12WSD-0011-R10b-SM-5GU79 17.7
GTEX-13O3O-0011-R10a-SM-5LUA9 16.9
GTEX-13JUV-0011-R10b-SM-5LZXR 16.8
GTEX-X4EP-0011-R10B-SM-4QASJ 16.6
GTEX-XMD1-0011-R10A-SM-4AT4A 16.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 16.3
GTEX-147F4-0011-R10b-SM-5S2WC 16.3
GTEX-131XW-0011-R10a-SM-5DUVA 15.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 15.6
GTEX-11WQC-0011-R10a-SM-57WCT 15.3
GTEX-13FLW-0011-R10b-SM-5LZZF 15.2
GTEX-145LU-0011-R10a-SM-5PNWJ 14.7
GTEX-14BIL-0011-R10a-SM-5SI75 14.7
GTEX-12WSM-0011-R10a-SM-5DUWV 14.5
GTEX-13OW6-0011-R10a-SM-5L3HE 14.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 14.0
GTEX-13OW7-0011-R10a-SM-5L3H3 14.0
GTEX-RVPU-0011-R10A-SM-2XCAH 14.0
GTEX-131XH-0011-R10a-SM-5EGLJ 13.9
GTEX-X585-0011-R10A-SM-46MUY 13.6
GTEX-ZV68-0011-R10a-SM-51MT7 12.6
GTEX-12WSF-0011-R10a-SM-5LZVH 12.4
GTEX-13JVG-0011-R10b-SM-5KM2P 12.3
GTEX-X4XX-0011-R10B-SM-46MWO 12.2
GTEX-S7SE-0011-R10A-SM-2XCDF 12.1
GTEX-TSE9-0011-R10A-SM-3DB7O 12.1
GTEX-YFC4-0011-R10a-SM-4SOK5 12.1
GTEX-13S7M-0011-R10b-SM-5PNZB 12.0
GTEX-ZVT3-0011-R10b-SM-57WB6 12.0
GTEX-X261-0011-R10B-SM-4E3JT 11.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 11.8
GTEX-N7MT-0011-R10A-SM-2I3E1 11.6
GTEX-147GR-0011-R10b-SM-5S2UM 11.5
GTEX-WWYW-0011-R10A-SM-3NB35 11.5
GTEX-13QIC-0011-R10a-SM-5O9C7 11.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 11.4
GTEX-ZUA1-0011-R10a-SM-51MT6 11.4
GTEX-13FXS-0011-R10a-SM-5J2MA 11.1
GTEX-13G51-0011-R10b-SM-5LZYF 10.9
GTEX-QVJO-0011-R10A-SM-2S1QJ 10.8
GTEX-13N2G-0011-R10a-SM-5MR34 10.7
GTEX-13FHO-0011-R10b-SM-5J2MM 10.6
GTEX-WVLH-0011-R10A-SM-3MJFM 10.5
GTEX-13NYS-0011-R10a-SM-5MR4S 10.4
GTEX-145MG-0011-R10a-SM-5PNWG 10.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 10.4
GTEX-OXRN-0011-R10A-SM-2I5GC 10.1
GTEX-P44H-0011-R10A-SM-2XCEK 9.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 9.7
GTEX-145LS-0011-R10a-SM-5PNUQ 9.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 9.7
GTEX-13NZA-0011-R10b-SM-5KM54 9.6
GTEX-13QJC-0011-R10a-SM-5SI63 9.6
GTEX-145MH-0011-R10b-SM-5PNUK 9.5
GTEX-QVUS-0011-R10A-SM-3GIK3 9.5
GTEX-11WQK-0011-R10a-SM-5BC6R 9.3
GTEX-131YS-0011-R10b-SM-5EQ5N 9.3
GTEX-13X6I-0011-R10a-SM-5PNWI 9.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 9.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 8.7
GTEX-139TS-0011-R10a-SM-5K7TU 8.7
GTEX-WZTO-0011-R10B-SM-4E3KB 8.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 8.6
GTEX-ZF28-0011-R10a-SM-4WWEH 8.5
GTEX-13NYB-0011-R10a-SM-5KM43 8.4
GTEX-13O3Q-0011-R10b-SM-5KM39 8.4
GTEX-14BIN-0011-R10a-SM-5S2UA 8.4
GTEX-T5JC-0011-R10A-SM-32PM2 8.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 8.2
GTEX-13SLX-0011-R10a-SM-5P9HV 8.2
GTEX-YJ89-0011-R10a-SM-4SOK9 8.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 7.8
GTEX-12WSH-0011-R10a-SM-5LZUS 7.5
GTEX-13X6J-0011-R10b-SM-5PNWA 7.5
GTEX-T6MN-0011-R10A-SM-32QP7 7.3
GTEX-NL4W-0011-R10A-SM-2I3DY 7.1
GTEX-QMR6-0011-R10A-SM-32PKO 7.1
GTEX-12126-0011-R10b-SM-5BC6T 7.0
GTEX-Z93S-0011-R10a-SM-4RGNM 7.0
GTEX-ZXG5-0011-R10a-SM-57WDD 6.9
GTEX-12WSE-0011-R10b-SM-5P9JV 6.6
GTEX-1313W-0011-R10b-SM-5DUXA 6.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 6.4
GTEX-QDT8-0011-R10A-SM-32PKG 6.4
GTEX-N7MS-0011-R10A-SM-2HMJK 6.1
GTEX-12WSC-0011-R10a-SM-5GU57 5.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 5.3
GTEX-11ZUS-0011-R10b-SM-5BC79 5.0
GTEX-WL46-0011-R10A-SM-3MJFQ 5.0
GTEX-13IVO-0011-R10a-SM-5LZY3 4.1
GTEX-NL3H-0011-R10A-SM-2I3E9 3.9
GTEX-11H98-0011-R10b-SM-5NQ98 3.8
GTEX-OXRO-0011-R10A-SM-2I5EH 3.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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