We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SREBF1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:19.6RPKM
FANTOM5:55.8Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA043343

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

19.6

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 19.6
Samples: 94

Max RPKM: 61
Min RPKM: 2.5
Std RPKM: 11
Median RPKM: 17
GTEX-13N1W-0011-R1b-SM-5MR4T 61.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 52.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 49.7
GTEX-13OW5-0011-R1b-SM-5L3GE 45.7
GTEX-XOTO-0011-R1B-SM-4B65C 40.7
GTEX-13OVL-0011-R1a-SM-5L3H5 38.9
GTEX-P44H-0011-R1A-SM-3NM8J 36.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 36.8
GTEX-11GSO-0011-R1b-SM-57WD3 36.7
GTEX-WZTO-0011-R1B-SM-3NMAR 34.0
GTEX-QVUS-0011-R1A-SM-3GAD2 33.3
GTEX-13G51-0011-R1a-SM-5LZYR 32.1
GTEX-13FHO-0011-R1b-SM-5KLZG 31.8
GTEX-13QJC-0011-R1b-SM-5S2UU 31.0
GTEX-1212Z-0011-R1b-SM-5BC72 30.8
GTEX-13JVG-0011-R1a-SM-5KM32 29.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 28.7
GTEX-WVLH-0011-R1A-SM-4MVOK 28.3
GTEX-12WSB-0011-R1b-SM-5P9EY 27.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 26.0
GTEX-13OW6-0011-R1a-SM-5L3HQ 26.0
GTEX-1399T-0011-R1b-SM-5DUWN 24.6
GTEX-QVJO-0011-R1A-SM-2S1QI 24.5
GTEX-X4XX-0011-R1B-SM-3P622 24.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 24.0
GTEX-13OW7-0011-R1b-SM-5L3HF 23.9
GTEX-13OW8-0011-R1a-SM-5L3HI 23.9
GTEX-WL46-0011-R1A-SM-3LK6M 23.6
GTEX-131XH-0011-R1a-SM-5DUWA 23.1
GTEX-13NZA-0011-R1b-SM-5LUAF 22.7
GTEX-13SLW-0011-R1a-SM-5S2W7 22.7
GTEX-11UD1-0011-R1b-SM-5BC7D 22.0
GTEX-12WSD-0011-R1b-SM-5LZVY 21.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 21.9
GTEX-13S7M-0011-R1b-SM-5PNZE 21.6
GTEX-12WSM-0011-R1a-SM-5LZW6 20.6
GTEX-UTHO-0011-R1A-SM-3GIJO 20.4
GTEX-N7MT-0011-R1a-SM-5SI7S 20.3
GTEX-12WSF-0011-R1a-SM-5DUVI 20.2
GTEX-131YS-0011-R1a-SM-5DUXC 19.8
GTEX-13N2G-0011-R1b-SM-5MR3G 18.9
GTEX-11ONC-0011-R1a-SM-57WD4 18.7
GTEX-13JUV-0011-R1a-SM-5LZY4 18.2
GTEX-X585-0011-R1B-SM-46MVE 18.0
GTEX-145LS-0011-R1b-SM-5PNUP 17.9
GTEX-XMD1-0011-R1A-SM-4AT4C 17.3
GTEX-S7SE-0011-R1A-SM-2XCDE 17.1
GTEX-132Q8-0011-R1a-SM-5EGLK 16.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 16.8
GTEX-13NYS-0011-R1b-SM-5MR55 16.0
GTEX-1313W-0011-R1b-SM-5EQ4A 15.9
GTEX-T6MN-0011-R1A-SM-32QOY 15.6
GTEX-11ZTS-0011-R1a-SM-5BC71 15.5
GTEX-13FXS-0011-R1a-SM-5K7U6 15.5
GTEX-QDT8-0011-R1A-SM-32PKS 15.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 15.0
GTEX-TSE9-0011-R1A-SM-3DB7E 14.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 14.5
GTEX-139TT-0011-R1a-SM-5LZVD 14.0
GTEX-13CF2-0011-R1a-SM-5LZY1 13.7
GTEX-12WSE-0011-R1b-SM-5GU4V 13.6
GTEX-QMR6-0011-R1A-SM-32PKW 13.5
GTEX-PWO3-0011-R1A-SM-2I5EW 13.4
GTEX-13X6I-0011-R1b-SM-5PNZC 13.2
GTEX-PVOW-0011-R1A-SM-32PL6 13.1
GTEX-13O3O-0011-R1b-SM-5KM2K 13.0
GTEX-13FHP-0011-R1b-SM-5K7XL 12.9
GTEX-N7MS-0011-R1a-SM-2HMJG 12.6
GTEX-144GO-0011-R1a-SM-5PNWO 12.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 12.2
GTEX-13FLW-0011-R1b-SM-5LZX2 12.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 12.1
GTEX-14ASI-0011-R1b-SM-5S2TY 11.9
GTEX-WWYW-0011-R1A-SM-3TW8G 11.8
GTEX-R55E-0011-R1A-SM-2TC6N 11.6
GTEX-13NYB-0011-R1b-SM-5KM4F 11.5
GTEX-YFC4-0011-R1a-SM-4V6EH 11.4
GTEX-T5JC-0011-R1A-SM-32PM6 11.3
GTEX-RNOR-0011-R1A-SM-5SI8F 10.8
GTEX-145LU-0011-R1a-SM-5Q5CE 10.1
GTEX-144GL-0011-R1a-SM-5PNZ5 9.4
GTEX-NPJ7-0011-R1a-SM-3GACT 9.0
GTEX-12WSH-0011-R1a-SM-5GU5V 8.7
GTEX-145MH-0011-R1b-SM-5PNWY 8.4
GTEX-13112-0011-R1b-SM-5HL7K 8.0
GTEX-YJ89-0011-R1a-SM-4RGLS 8.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 7.4
GTEX-13FTY-0011-R1a-SM-5LZXE 6.9
GTEX-ZE7O-0011-R1a-SM-57WDM 6.7
GTEX-ZF28-0011-R1a-SM-4WWD1 5.0
GTEX-NL3H-0011-R1a-SM-48TDJ 4.8
GTEX-NPJ8-0011-R1a-SM-33HCB 4.1
GTEX-13PDP-0011-R1a-SM-5PNX5 4.0
GTEX-139T8-0011-R1a-SM-5HL75 2.5
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

55.8

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 55.8
FF:10153-102I9 76 years, female 96.3
FF:10169-103B7 60 years, female 47.3
FF:10374-105G5 89 years, female 23.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.