We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SREBF1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.5TPM
GTEx:69.9RPKM
FANTOM5:177.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA043343

 

Bile duct cells

Not detected  

Hepatocytes

Not detected  
 
 
 

LIVER - HPA RNA-seq

Average TPM

17.5

N/A Female, age 60
Sample 1
TPM: 41.9
overview Male, age 54
Sample 2
TPM: 24.1
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 21.2
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 3.7
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 3.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 14.7
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 8.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 20.0
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 11.3
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 25.3
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

69.9

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 69.9
Samples: 119

Max RPKM: 416.2
Min RPKM: 11.1
Std RPKM: 51.7
Median RPKM: 57.3
GTEX-11ZUS-2526-SM-59872 416.2
GTEX-WZTO-0626-SM-4PQYY 220.1
GTEX-X4EP-1026-SM-4QAS5 195.2
GTEX-REY6-1226-SM-48FDR 191.4
GTEX-11NV4-1326-SM-5HL6V 173.1
GTEX-QEG4-1826-SM-4R1JN 158.2
GTEX-11NUK-1226-SM-5P9GM 156.6
GTEX-ZYT6-0626-SM-5E45V 155.1
GTEX-11EQ9-0526-SM-5A5JZ 143.5
GTEX-11OF3-0726-SM-5BC4Z 140.6
GTEX-13OW6-2626-SM-5IFF2 138.5
GTEX-13N11-0926-SM-5IJG2 138.2
GTEX-14DAQ-1726-SM-5S2R2 123.3
GTEX-11GSP-0626-SM-5986T 122.9
GTEX-11ZVC-0726-SM-5FQT9 111.7
GTEX-147F4-1426-SM-5LUA8 111.4
GTEX-11ZTS-1426-SM-5EQMM 109.8
GTEX-13112-1426-SM-5EGH8 107.7
GTEX-12696-0826-SM-5EGGE 105.0
GTEX-T6MN-1226-SM-3NMA5 102.7
GTEX-ZAB4-0826-SM-5LU9D 101.1
GTEX-X4XY-1626-SM-46MVN 99.5
GTEX-11DXY-0526-SM-5EGGQ 99.4
GTEX-X261-1726-SM-4PQYT 96.2
GTEX-11WQC-0726-SM-5EQMR 93.5
GTEX-147JS-1126-SM-5RQIW 93.2
GTEX-ZYY3-0626-SM-5NQ6W 91.1
GTEX-13113-1326-SM-5GCOI 90.4
GTEX-S4Z8-0526-SM-4AD4T 87.2
GTEX-13NYB-1026-SM-5IFH3 84.4
GTEX-145MF-0826-SM-5QGQA 83.3
GTEX-145LU-1326-SM-5LU9N 82.8
GTEX-11DXZ-0126-SM-5EGGY 78.9
GTEX-RNOR-1426-SM-48FDJ 75.3
GTEX-12WSI-0226-SM-5GCNA 74.0
GTEX-Y5V5-0926-SM-4VBPZ 74.0
GTEX-YECK-1926-SM-4W21H 73.5
GTEX-13NZB-0626-SM-5IFH6 73.0
GTEX-139TU-0826-SM-5IJFG 72.9
GTEX-ZVT3-1626-SM-5GU66 72.4
GTEX-13SLX-1226-SM-5S2Q6 71.5
GTEX-XBEC-1526-SM-4AT68 71.1
GTEX-S33H-1626-SM-4AD68 70.5
GTEX-YEC4-0826-SM-5P9FV 70.3
GTEX-QEL4-1226-SM-447A4 70.2
GTEX-13N2G-0926-SM-5IFGJ 70.1
GTEX-13FTW-1126-SM-5J2NV 69.4
GTEX-1212Z-0226-SM-59HLF 68.0
GTEX-Q2AG-1126-SM-48U1P 67.6
GTEX-132NY-0926-SM-5P9G3 64.4
GTEX-R53T-0326-SM-48FEC 64.2
GTEX-SJXC-1226-SM-4DM78 62.8
GTEX-13VXU-0926-SM-5IFFH 62.4
GTEX-131YS-1626-SM-5HL6C 61.5
GTEX-RU72-1426-SM-46MUF 60.9
GTEX-14A5I-1726-SM-5QGQ5 59.7
GTEX-WFON-1726-SM-4LVMQ 59.0
GTEX-12ZZZ-1326-SM-59HKW 58.7
GTEX-12WSG-0626-SM-5FQTQ 57.3
GTEX-YFC4-1526-SM-5IFJS 57.3
GTEX-139TS-1426-SM-5IFJD 57.2
GTEX-13PVR-0126-SM-5S2PY 56.6
GTEX-P78B-1326-SM-3P611 56.6
GTEX-14AS3-0126-SM-5Q5F4 55.9
GTEX-ZF2S-3026-SM-4WWCH 54.2
GTEX-WYVS-1926-SM-4PQZ2 52.3
GTEX-X3Y1-2726-SM-4PQZH 52.3
GTEX-OOBJ-0826-SM-3NB2K 49.7
GTEX-13FTZ-0726-SM-5IFFY 49.4
GTEX-1497J-0726-SM-5Q5D1 49.4
GTEX-12KS4-1326-SM-5LUB3 48.4
GTEX-UTHO-2426-SM-4JBHD 48.4
GTEX-TKQ2-1726-SM-4DXUP 47.4
GTEX-RTLS-1326-SM-46MUN 47.3
GTEX-UPK5-1426-SM-4JBHH 47.1
GTEX-Z9EW-0426-SM-5CVM9 46.9
GTEX-13NZ9-1326-SM-5MR3V 46.5
GTEX-12WSD-1426-SM-5GCN9 45.6
GTEX-X4EO-1126-SM-4QARQ 44.9
GTEX-PX3G-0826-SM-48TZS 44.7
GTEX-ZPU1-0826-SM-57WG2 44.4
GTEX-U3ZN-0226-SM-3DB8D 44.1
GTEX-ZTPG-1426-SM-51MT3 43.7
GTEX-13QJC-0726-SM-5RQJK 43.2
GTEX-QESD-2026-SM-447BI 43.0
GTEX-YB5E-0326-SM-5IFHU 42.9
GTEX-QDVN-0826-SM-48TZ2 42.2
GTEX-UPIC-0926-SM-4IHLV 40.2
GTEX-ZAB5-0426-SM-5CVMI 38.9
GTEX-ZZPU-0426-SM-5GZYH 38.2
GTEX-14C38-1526-SM-5RQJ7 37.8
GTEX-146FH-1526-SM-5NQBU 36.9
GTEX-12WSM-0726-SM-5GCOW 36.0
GTEX-131XH-0626-SM-5LZWH 36.0
GTEX-144GM-1326-SM-5LU5E 34.8
GTEX-RWSA-1426-SM-47JXA 34.3
GTEX-145MO-2326-SM-5NQ9K 33.4
GTEX-1269C-0626-SM-5FQSS 33.1
GTEX-13FLV-0326-SM-5N9DJ 32.0
GTEX-RN64-1826-SM-48FDV 29.7
GTEX-WQUQ-1926-SM-4OOSA 28.5
GTEX-139YR-0226-SM-5IFEM 27.4
GTEX-14753-1626-SM-5NQ9L 26.4
GTEX-S32W-1926-SM-4AD63 26.3
GTEX-Q734-0326-SM-48U15 25.8
GTEX-XOTO-0826-SM-4B65O 25.8
GTEX-Y5LM-0426-SM-4VBRO 25.3
GTEX-14E1K-0326-SM-5S2PE 25.1
GTEX-1399R-1226-SM-5P9GF 24.9
GTEX-QV44-0326-SM-4R1KD 24.3
GTEX-1399T-0826-SM-5IFES 23.3
GTEX-VUSG-0126-SM-4KL1X 23.3
GTEX-131XE-0326-SM-5LZVO 23.2
GTEX-ZVP2-0626-SM-51MSO 22.9
GTEX-13O3O-1826-SM-5IFGW 20.7
GTEX-ZVT4-0626-SM-5E45T 19.7
GTEX-ZF29-2026-SM-4WWB7 17.0
GTEX-12WSL-0226-SM-5CVMJ 16.7
GTEX-RM2N-1926-SM-48FCU 11.1
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

177.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 177.1
FF:10018-101C9 64,69,70 years, mixed 177.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.