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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.4TPM
GTEx:13.7RPKM
FANTOM5:70.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA023690

  

Adipocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Low
 
 
 

Antibody staining

Antibody HPA023690

  

Fibroblasts

 Low  
    
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

24.4
N/A Female, age 80
Sample 1
TPM: 17.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 16.6
N/A Female, age 57
Sample 3
TPM: 15.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 25.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 47.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 13.7
Samples: 350

Max RPKM: 27
Min RPKM: 5.5
Std RPKM: 2.7
Median RPKM: 13.3
GTEX-139D8-0326-SM-5IJCJ 27.0
GTEX-14E6C-0226-SM-5S2N3 25.7
GTEX-145LS-0226-SM-5O9A5 21.9
GTEX-145MO-0426-SM-5QGP6 21.3
GTEX-R55F-1426-SM-2TF53 21.0
GTEX-RTLS-0226-SM-2TF5E 21.0
GTEX-TSE9-0226-SM-3DB84 20.0
GTEX-POYW-0726-SM-2XCEO 19.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.7
Samples: 227

Max RPKM: 29
Min RPKM: 3.4
Std RPKM: 3.9
Median RPKM: 13.4
GTEX-WFJO-1026-SM-3GIKL 29.0
GTEX-113JC-0726-SM-5GZZR 27.4
GTEX-ZTX8-0726-SM-59HL9 26.9
GTEX-14753-2526-SM-5LU97 23.9
GTEX-14ICL-0926-SM-5S2TU 22.0
GTEX-ZQUD-0526-SM-57WG4 22.0
GTEX-12KS4-1526-SM-5EQ6E 21.9
GTEX-11WQK-1526-SM-5EGKN 21.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

70.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 70.2
FF:10010-101C1 65,65,76 years, mixed 70.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.