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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:18.9RPKM
FANTOM5:172.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA066285

 

Antibody CAB070124

 

Glial cells

Not detected   Not detected  

Neuronal cells

Medium   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

18.9

GTEx sample id

RPKM

14.719.223.36.531.505101520253035
 
14.719.223.36.531.505101520253035

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 18.9
Samples: 117

Max RPKM: 39.5
Min RPKM: 6.5
Std RPKM: 6.1
Median RPKM: 19.2
GTEX-X585-0011-R5A-SM-46MVI 39.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 31.5
GTEX-145MH-0011-R5a-SM-5P9JT 31.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 29.5
GTEX-145LS-0011-R5a-SM-5SI65 29.4
GTEX-1399T-0011-R5b-SM-5IJDK 28.9
GTEX-13O3O-0011-R5b-SM-5KM44 28.8
GTEX-13X6I-0011-R5a-SM-5PNWW 28.7
GTEX-OHPN-0011-R5A-SM-2I5FF 28.1
GTEX-WWYW-0011-R5A-SM-3NB3E 28.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 26.7
GTEX-WL46-0011-R5A-SM-3LK6V 26.4
GTEX-13X6K-0011-R5b-SM-5PNUE 25.7
GTEX-N7MS-0011-R5a-SM-2HMK8 25.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 25.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 24.8
GTEX-13FXS-0011-R5b-SM-5LZYE 24.8
GTEX-QVJO-0011-R5A-SM-2S1QM 24.7
GTEX-1313W-0011-R5b-SM-5L3EP 24.5
GTEX-13SLX-0011-R5a-SM-5O9BV 24.2
GTEX-12WSF-0011-R5a-SM-5HL8K 24.1
GTEX-14ABY-0011-R5b-SM-5SI7B 24.1
GTEX-R55E-0011-R5A-SM-2TC5N 24.1
GTEX-13FLW-0011-R5a-SM-5LZX6 23.9
GTEX-13G51-0011-R5a-SM-5L3EB 23.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 23.8
GTEX-131YS-0011-R5b-SM-5K7YB 23.7
GTEX-T5JC-0011-R5A-SM-32PLK 23.6
GTEX-13NYB-0011-R5a-SM-5MR45 23.5
GTEX-13OVL-0011-R5b-SM-5L3FU 23.3
GTEX-WZTO-0011-R5B-SM-3NMC5 23.1
GTEX-13OW7-0011-R5b-SM-5O9DM 22.6
GTEX-13VXU-0011-R5a-SM-5O9D7 22.6
GTEX-14BIM-0011-R5b-SM-5S2RM 22.6
GTEX-13OVH-0011-R5b-SM-5KM4L 22.5
GTEX-WVLH-0011-R5A-SM-3MJFW 22.4
GTEX-ZUA1-0011-R5b-SM-51MTG 22.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 21.9
GTEX-13X6J-0011-R5b-SM-5PNWT 21.9
GTEX-11GSP-0011-R5a-SM-57WBE 21.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 21.8
GTEX-13OW5-0011-R5b-SM-5L3FR 21.7
GTEX-NL4W-0011-R5a-SM-2I3GD 21.6
GTEX-13S7M-0011-R5b-SM-5P9HS 21.5
GTEX-11H98-0011-R5b-SM-57WCF 21.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 21.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 20.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 20.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 20.7
GTEX-132Q8-0011-R5a-SM-5IJDM 20.5
GTEX-XOTO-0011-R5A-SM-4B657 20.5
GTEX-13OW6-0011-R5a-SM-5O9BK 20.3
GTEX-S7SE-0011-R5A-SM-2XCDA 20.2
GTEX-11OF3-0011-R5a-SM-57WB4 20.0
GTEX-12WSC-0011-R5b-SM-5CVNS 19.9
GTEX-14BIN-0011-R5b-SM-5SI78 19.8
GTEX-Z93S-0011-R5b-SM-4RGNI 19.6
GTEX-N7MT-0011-R5a-SM-2I3G6 19.4
GTEX-13FLV-0011-R5a-SM-5LZWT 19.2
GTEX-13NYS-0011-R5a-SM-5MR4D 19.1
GTEX-P44H-0011-R5A-SM-2XCEX 19.0
GTEX-11NV4-0011-R5a-SM-5NQ88 18.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 18.6
GTEX-RVPU-0011-R5A-SM-2XCAD 18.3
GTEX-RVPV-0011-R5A-SM-2TF69 18.3
GTEX-144GL-0011-R5b-SM-5PNUJ 18.2
GTEX-RU72-0011-R5A-SM-2TF6U 18.2
GTEX-PVOW-0011-R5A-SM-32PL7 18.1
GTEX-12ZZX-0011-R5a-SM-5HL89 17.5
GTEX-13CZV-0011-R5a-SM-5K7XA 17.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 17.2
GTEX-12WSB-0011-R5b-SM-5GU67 17.1
GTEX-12WSD-0011-R5b-SM-5CVNG 17.1
GTEX-X4XX-0011-R5A-SM-46MWN 16.6
GTEX-13JUV-0011-R5a-SM-5LZY5 16.5
GTEX-13FHP-0011-R5b-SM-5LZY2 16.1
GTEX-QMR6-0011-R5A-SM-32PKT 16.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 15.8
GTEX-TSE9-0011-R5A-SM-3DB7J 15.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 15.6
GTEX-X261-0011-R5A-SM-3NMB4 15.5
GTEX-T6MN-0011-R5A-SM-32QPD 15.3
GTEX-YFC4-0011-R5a-SM-4RGLR 15.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 15.3
GTEX-ZE7O-0011-R5a-SM-57WBO 15.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 15.0
GTEX-XMD1-0011-R5A-SM-4AT47 14.7
GTEX-YJ89-0011-R5a-SM-4V6GM 14.7
GTEX-13JVG-0011-R5a-SM-5MR4O 14.4
GTEX-NL3H-0011-R5a-SM-2I3GB 14.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 14.1
GTEX-11UD1-0011-R5b-SM-5P9FP 13.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 13.8
GTEX-ZXG5-0011-R5b-SM-57WBN 13.5
GTEX-ZVT3-0011-R5a-SM-51MSI 13.4
GTEX-11WQC-0011-R5a-SM-5BC74 12.9
GTEX-13112-0011-R5b-SM-5DUV8 12.9
GTEX-144GO-0011-R5a-SM-5PNUR 12.8
GTEX-T2IS-0011-R5A-SM-32QP4 12.8
GTEX-13CIG-0011-R5b-SM-5L3F2 12.4
GTEX-1477Z-0011-R5b-SM-5PNUO 11.9
GTEX-139TT-0011-R5b-SM-5K7W8 11.7
GTEX-139TS-0011-R5b-SM-5J2MZ 10.8
GTEX-NPJ7-0011-R5a-SM-33HBK 10.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 10.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 10.3
GTEX-1445S-0011-R5a-SM-5PNUS 9.8
GTEX-UTHO-0011-R5A-SM-3GIJD 9.8
GTEX-OXRN-0011-R5A-SM-2I5EF 9.7
GTEX-13CF2-0011-R5a-SM-5LZWS 9.4
GTEX-ZV68-0011-R5a-SM-4YCDW 9.0
GTEX-13NZA-0011-R5b-SM-5KM4K 8.5
GTEX-S7PM-0011-R5A-SM-3NM8G 8.2
GTEX-145MG-0011-R5b-SM-5S2VU 7.6
GTEX-139T8-0011-R5b-SM-5J1MO 7.4
GTEX-12WSA-0011-R5b-SM-5GU5I 7.3
GTEX-12WSH-0011-R5b-SM-5P9F3 6.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

172.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 172.2
FF:10379-105H1 89 years, female 213.1
FF:10164-103B2 76 years, female 131.3

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