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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:34.7TPM
GTEx:10.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Low
 

Antibody staining

Antibody HPA066285

 

Antibody CAB070124

 

Endothelial cells

Not detected   Medium  

Glial cells

Not detected   Not detected  

Neuronal cells

Low   Low  

Neuropil

Low   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

34.7

N/A Male, age 5
Sample 1
TPM: 21.3
overview Female, age 40
Sample 2
TPM: 57.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 24.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

10.6

GTEx sample id

RPKM

9.911.613.36.518.2024681012141618202224
 
9.911.613.36.518.2024681012141618202224

Brain - Cortex

Brain - Cortex
RPKM: 12.0
Samples: 114

Max RPKM: 24.7
Min RPKM: 6.5
Std RPKM: 2.9
Median RPKM: 11.6
GTEX-X585-3026-SM-46MWF 24.7
GTEX-13IVO-2926-SM-5L3CZ 21.4
GTEX-11OC5-0726-SM-5P9JK 21.2
GTEX-13OVJ-2826-SM-5L3GW 18.2
GTEX-11O72-2926-SM-5BC4V 17.9
GTEX-1445S-3026-SM-5O9BR 17.0
GTEX-11ONC-2926-SM-5P9JM 16.5
GTEX-T5JC-2426-SM-3NMDB 16.5
GTEX-ZVT3-3026-SM-5E43N 16.4
GTEX-13JVG-3126-SM-5L3FH 16.3
GTEX-13NYC-2826-SM-5K7WR 16.2
GTEX-NPJ8-1526-SM-2D7VU 15.9
GTEX-145LS-3126-SM-5Q5BY 15.6
GTEX-11EMC-3226-SM-5EGKW 15.5
GTEX-13QIC-2926-SM-5J2NF 15.5
GTEX-11GSO-2926-SM-5HL73 15.1
GTEX-R55F-1326-SM-5S2V4 14.6
GTEX-11GS4-3126-SM-5A5LH 14.4
GTEX-12ZZY-3026-SM-5GCOU 14.4
GTEX-12WSD-3126-SM-5HL7P 14.3
GTEX-11TTK-2926-SM-5PNYP 14.0
GTEX-1399T-3026-SM-5KLZC 14.0
GTEX-11WQK-3026-SM-5EQL6 13.9
GTEX-WWYW-3126-SM-3NB39 13.8
GTEX-13OW7-3026-SM-5L3GY 13.6
GTEX-13SLX-3126-SM-5S2Q5 13.6
GTEX-11GSP-3226-SM-5986O 13.4
GTEX-WHSE-3026-SM-3P5ZH 13.4
GTEX-117XS-3026-SM-5N9CA 13.3
GTEX-13NYB-3026-SM-5IJD7 13.2
GTEX-13S7M-3126-SM-5RQJQ 13.1
GTEX-13G51-3026-SM-5IJB8 12.9
GTEX-13OVH-3026-SM-5MR4N 12.9
GTEX-12ZZZ-3026-SM-5BC67 12.8
GTEX-WL46-2926-SM-3LK82 12.7
GTEX-132Q8-3026-SM-5PNVG 12.6
GTEX-Y111-2726-SM-4TT3N 12.6
GTEX-QVUS-2826-SM-3GADB 12.4
GTEX-13PL6-3126-SM-5LUAR 12.3
GTEX-131XW-3126-SM-5LZUC 12.1
GTEX-13OW6-3026-SM-5J2MI 12.1
GTEX-14BMV-3026-SM-5S2PQ 12.1
GTEX-N7MT-1126-SM-5SI7V 12.1
GTEX-Q2AG-2926-SM-2HMJ3 12.1
GTEX-111FC-3126-SM-5GZZ2 12.0
GTEX-NPJ7-2726-SM-2I3FT 12.0
GTEX-13OW8-2826-SM-5L3GC 11.9
GTEX-T6MN-2626-SM-32PMQ 11.9
GTEX-XOTO-3026-SM-4B65M 11.9
GTEX-ZAK1-3026-SM-5S2MJ 11.9
GTEX-12WSA-2926-SM-5EQ4D 11.8
GTEX-131YS-3126-SM-5KLYT 11.8
GTEX-13NYS-3126-SM-5KLYV 11.8
GTEX-13O3Q-2926-SM-5KM45 11.8
GTEX-13PVQ-3026-SM-5SI93 11.8
GTEX-14ASI-3026-SM-5S2PN 11.7
GTEX-RNOR-2326-SM-2TF4I 11.7
GTEX-1128S-2726-SM-5H12C 11.6
GTEX-13JUV-2926-SM-5LZX7 11.5
GTEX-145MF-2726-SM-5O995 11.5
GTEX-145MG-3026-SM-5RQJA 11.5
GTEX-1192X-3126-SM-5N9BY 11.4
GTEX-1313W-3126-SM-5LZUI 11.4
GTEX-13FLW-1426-SM-5K7YE 11.4
GTEX-RU72-3026-SM-5SI7Y 11.4
GTEX-X4XX-3026-SM-3NMB2 11.3
GTEX-13FXS-3126-SM-5J2NN 11.2
GTEX-YFC4-3126-SM-5PNV6 11.2
GTEX-11DXY-3226-SM-5GIDE 11.1
GTEX-13O3O-3126-SM-5KM3H 11.1
GTEX-12126-1026-SM-5P9JJ 11.0
GTEX-11PRG-2926-SM-5987A 10.9
GTEX-12WSH-3026-SM-5CVNI 10.8
GTEX-13FHO-3026-SM-5J1O9 10.8
GTEX-13VXU-2926-SM-5LU5C 10.7
GTEX-WVLH-3026-SM-3MJG9 10.6
GTEX-11NUK-2926-SM-5A5MD 10.5
GTEX-144GL-3026-SM-5Q5CW 10.5
GTEX-ZAJG-3126-SM-5HL9J 10.5
GTEX-12WSC-3026-SM-5GCNF 10.4
GTEX-ZUA1-3026-SM-59HJC 10.4
GTEX-ZYFD-3026-SM-5E44C 10.3
GTEX-13FHP-3026-SM-5IJBS 10.2
GTEX-11ZUS-2926-SM-5FQSL 10.1
GTEX-145MH-3026-SM-5Q5DZ 10.1
GTEX-XLM4-3026-SM-4AT6L 9.9
GTEX-12ZZX-2926-SM-5GCOQ 9.8
GTEX-OXRN-2426-SM-2I5EQ 9.8
GTEX-QDT8-2926-SM-32PKC 9.8
GTEX-QMR6-1426-SM-32PLA 9.8
GTEX-Z93S-2926-SM-57WB9 9.7
GTEX-T2IS-3026-SM-32QPM 9.6
GTEX-Y8DK-0826-SM-4TT3T 9.5
GTEX-YJ89-3026-SM-5IFJI 9.5
GTEX-11DXW-1126-SM-5H12Q 9.4
GTEX-PWO3-0926-SM-2I5EY 9.4
GTEX-13X6K-2926-SM-5Q5D5 9.3
GTEX-QVJO-1426-SM-2S1QY 9.3
GTEX-WZTO-2926-SM-3NM9I 9.2
GTEX-ZE7O-3126-SM-5HL5X 9.2
GTEX-TSE9-3026-SM-3DB76 9.0
GTEX-ZZPT-3026-SM-5GZXH 9.0
GTEX-11EI6-3026-SM-5GZZO 8.8
GTEX-147GR-3026-SM-5S2ML 8.8
GTEX-1117F-3226-SM-5N9CT 8.7
GTEX-12ZZW-2926-SM-5LZUP 8.7
GTEX-PVOW-2526-SM-2XCF7 8.6
GTEX-144FL-3026-SM-5O99C 8.5
GTEX-13X6J-3026-SM-5Q5CU 8.1
GTEX-14A5I-2926-SM-5Q5CQ 7.7
GTEX-UTHO-3026-SM-3GAFB 7.5
GTEX-139T8-1026-SM-5J2MC 6.9
GTEX-11NV4-2126-SM-5N9DS 6.7
GTEX-11OF3-2926-SM-5HL78 6.5
Show all
7.78.810.24.113.70246810121416
 
7.78.810.24.113.70246810121416

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 9.1
Samples: 108

Max RPKM: 17
Min RPKM: 4.1
Std RPKM: 2
Median RPKM: 8.7
GTEX-X585-0011-R10A-SM-46MUY 17.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 15.6
GTEX-T5JC-0011-R10A-SM-32PM2 14.5
GTEX-13X6I-0011-R10a-SM-5PNWI 14.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 13.7
GTEX-13QIC-0011-R10a-SM-5O9C7 12.4
GTEX-14BIL-0011-R10a-SM-5SI75 12.3
GTEX-NL4W-0011-R10A-SM-2I3DY 12.3
GTEX-13IVO-0011-R10a-SM-5LZY3 11.6
GTEX-XMD1-0011-R10A-SM-4AT4A 11.6
GTEX-12WSA-0011-R10b-SM-5P9ET 11.5
GTEX-13N1W-0011-R10b-SM-5MR4H 11.5
GTEX-13N2G-0011-R10a-SM-5MR34 11.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 11.3
GTEX-13O3O-0011-R10a-SM-5LUA9 11.0
GTEX-145LS-0011-R10a-SM-5PNUQ 11.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 11.0
GTEX-12WSH-0011-R10a-SM-5LZUS 10.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 10.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 10.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 10.6
GTEX-X261-0011-R10B-SM-4E3JT 10.6
GTEX-13OW7-0011-R10a-SM-5L3H3 10.5
GTEX-13SLW-0011-R10a-SM-5S2UI 10.5
GTEX-13NYS-0011-R10a-SM-5MR4S 10.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 10.2
GTEX-13OW6-0011-R10a-SM-5L3HE 10.2
GTEX-13SLX-0011-R10a-SM-5P9HV 10.2
GTEX-13NYB-0011-R10a-SM-5KM43 10.1
GTEX-13OVL-0011-R10a-SM-5L3GS 10.1
GTEX-13X6K-0011-R10a-SM-5P9JR 10.1
GTEX-131YS-0011-R10b-SM-5EQ5N 9.9
GTEX-13JVG-0011-R10b-SM-5KM2P 9.9
GTEX-11WQC-0011-R10a-SM-57WCT 9.8
GTEX-WWYW-0011-R10A-SM-3NB35 9.8
GTEX-13G51-0011-R10b-SM-5LZYF 9.7
GTEX-X4XX-0011-R10B-SM-46MWO 9.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 9.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 9.6
GTEX-1477Z-0011-R10b-SM-5S2RF 9.5
GTEX-13S7M-0011-R10b-SM-5PNZB 9.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 9.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 9.3
GTEX-ZV68-0011-R10a-SM-51MT7 9.3
GTEX-1445S-0011-R10a-SM-5PNWB 9.1
GTEX-145LU-0011-R10a-SM-5PNWJ 9.1
GTEX-N7MT-0011-R10A-SM-2I3E1 9.1
GTEX-S7SE-0011-R10A-SM-2XCDF 9.1
GTEX-XLM4-0011-R10A-SM-4AT5P 9.1
GTEX-13QJC-0011-R10a-SM-5SI63 9.0
GTEX-13FLW-0011-R10b-SM-5LZZF 8.9
GTEX-12WSM-0011-R10a-SM-5DUWV 8.8
GTEX-13CZV-0011-R10b-SM-5LZYD 8.8
GTEX-13JUV-0011-R10b-SM-5LZXR 8.8
GTEX-13NZA-0011-R10b-SM-5KM54 8.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 8.7
GTEX-ZVT3-0011-R10b-SM-57WB6 8.7
GTEX-13FHO-0011-R10b-SM-5J2MM 8.6
GTEX-13O3Q-0011-R10b-SM-5KM39 8.6
GTEX-145MG-0011-R10a-SM-5PNWG 8.6
GTEX-NL3H-0011-R10A-SM-2I3E9 8.6
GTEX-WL46-0011-R10A-SM-3MJFQ 8.6
GTEX-13FXS-0011-R10a-SM-5J2MA 8.5
GTEX-RVPU-0011-R10A-SM-2XCAH 8.5
GTEX-1313W-0011-R10b-SM-5DUXA 8.4
GTEX-131XW-0011-R10a-SM-5DUVA 8.4
GTEX-145MH-0011-R10b-SM-5PNUK 8.4
GTEX-YFC4-0011-R10a-SM-4SOK5 8.4
GTEX-11H98-0011-R10b-SM-5NQ98 8.3
GTEX-12WSF-0011-R10a-SM-5LZVH 8.3
GTEX-12ZZX-0011-R10b-SM-5DUWK 8.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 8.3
GTEX-12WSE-0011-R10b-SM-5P9JV 8.2
GTEX-13OW8-0011-R10a-SM-5L3H6 8.2
GTEX-QMR6-0011-R10A-SM-32PKO 8.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 8.2
GTEX-12WSC-0011-R10a-SM-5GU57 8.1
GTEX-T6MN-0011-R10A-SM-32QP7 8.0
GTEX-147GR-0011-R10b-SM-5S2UM 7.9
GTEX-ZUA1-0011-R10a-SM-51MT6 7.8
GTEX-14BIN-0011-R10a-SM-5S2UA 7.7
GTEX-QVUS-0011-R10A-SM-3GIK3 7.7
GTEX-WVLH-0011-R10A-SM-3MJFM 7.7
GTEX-ZF28-0011-R10a-SM-4WWEH 7.7
GTEX-OXRO-0011-R10A-SM-2I5EH 7.6
GTEX-QDT8-0011-R10A-SM-32PKG 7.6
GTEX-X4EP-0011-R10B-SM-4QASJ 7.6
GTEX-147F4-0011-R10b-SM-5S2WC 7.5
GTEX-P44H-0011-R10A-SM-2XCEK 7.5
GTEX-N7MS-0011-R10A-SM-2HMJK 7.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 7.4
GTEX-11ZUS-0011-R10b-SM-5BC79 7.3
GTEX-WZTO-0011-R10B-SM-4E3KB 7.3
GTEX-YJ89-0011-R10a-SM-4SOK9 7.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.3
GTEX-13X6J-0011-R10b-SM-5PNWA 7.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 7.1
GTEX-131XH-0011-R10a-SM-5EGLJ 7.0
GTEX-TSE9-0011-R10A-SM-3DB7O 6.9
GTEX-12126-0011-R10b-SM-5BC6T 6.8
GTEX-Z93S-0011-R10a-SM-4RGNM 6.7
GTEX-OXRN-0011-R10A-SM-2I5GC 6.4
GTEX-11WQK-0011-R10a-SM-5BC6R 6.3
GTEX-12WSD-0011-R10b-SM-5GU79 6.1
GTEX-14753-0011-R10b-SM-5S2WE 5.6
GTEX-139TS-0011-R10a-SM-5K7TU 5.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 4.6
GTEX-ZXG5-0011-R10a-SM-57WDD 4.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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