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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:71.6TPM
GTEx:59.6RPKM
FANTOM5:865.0Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Low
 

Antibody staining

Antibody HPA066285

 

Antibody CAB070124

 

Bile duct cells

Not detected   Not detected  

Hepatocytes

Low   Not detected  
   
   
   

LIVER - HPA RNA-seq

Average TPM

71.6

N/A Female, age 60
Sample 1
TPM: 96.2
overview Male, age 54
Sample 2
TPM: 59.9
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 84.3
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 32.7
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 33.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 78.1
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 62.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 74.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 59.2
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 134.6
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

59.6

GTEx sample id

RPKM

43.552.367.918.694.5020406080100120140
 
43.552.367.918.694.5020406080100120140

Liver

Liver
RPKM: 59.6
Samples: 119

Max RPKM: 143.5
Min RPKM: 18.6
Std RPKM: 23.2
Median RPKM: 52.3
GTEX-REY6-1226-SM-48FDR 143.5
GTEX-RTLS-1326-SM-46MUN 141.4
GTEX-1497J-0726-SM-5Q5D1 138.9
GTEX-X261-1726-SM-4PQYT 113.6
GTEX-ZYY3-0626-SM-5NQ6W 113.6
GTEX-13QJC-0726-SM-5RQJK 111.4
GTEX-13113-1326-SM-5GCOI 108.3
GTEX-ZAB4-0826-SM-5LU9D 105.5
GTEX-X4XY-1626-SM-46MVN 94.5
GTEX-12WSL-0226-SM-5CVMJ 93.7
GTEX-13SLX-1226-SM-5S2Q6 92.9
GTEX-14C38-1526-SM-5RQJ7 92.6
GTEX-X4EP-1026-SM-4QAS5 92.1
GTEX-14A5I-1726-SM-5QGQ5 88.6
GTEX-146FH-1526-SM-5NQBU 85.6
GTEX-139TU-0826-SM-5IJFG 84.3
GTEX-132NY-0926-SM-5P9G3 81.9
GTEX-QDVN-0826-SM-48TZ2 81.9
GTEX-S33H-1626-SM-4AD68 81.0
GTEX-YEC4-0826-SM-5P9FV 79.9
GTEX-13NZ9-1326-SM-5MR3V 79.0
GTEX-S32W-1926-SM-4AD63 78.7
GTEX-145MO-2326-SM-5NQ9K 77.9
GTEX-12WSG-0626-SM-5FQTQ 75.2
GTEX-12WSI-0226-SM-5GCNA 74.5
GTEX-Q734-0326-SM-48U15 73.5
GTEX-QEL4-1226-SM-447A4 72.0
GTEX-144GM-1326-SM-5LU5E 71.3
GTEX-ZTPG-1426-SM-51MT3 70.9
GTEX-131XE-0326-SM-5LZVO 68.1
GTEX-Q2AG-1126-SM-48U1P 67.7
GTEX-11NV4-1326-SM-5HL6V 67.4
GTEX-VUSG-0126-SM-4KL1X 66.5
GTEX-13NZB-0626-SM-5IFH6 65.8
GTEX-139TS-1426-SM-5IFJD 65.2
GTEX-XBEC-1526-SM-4AT68 65.0
GTEX-Y5LM-0426-SM-4VBRO 63.8
GTEX-13N2G-0926-SM-5IFGJ 63.7
GTEX-ZPU1-0826-SM-57WG2 63.0
GTEX-11NUK-1226-SM-5P9GM 62.9
GTEX-13O3O-1826-SM-5IFGW 62.7
GTEX-P78B-1326-SM-3P611 61.7
GTEX-YB5E-0326-SM-5IFHU 60.9
GTEX-ZVT3-1626-SM-5GU66 60.3
GTEX-TKQ2-1726-SM-4DXUP 58.3
GTEX-12WSD-1426-SM-5GCN9 58.1
GTEX-S4Z8-0526-SM-4AD4T 58.1
GTEX-14DAQ-1726-SM-5S2R2 57.8
GTEX-12696-0826-SM-5EGGE 57.6
GTEX-13FTW-1126-SM-5J2NV 56.9
GTEX-12KS4-1326-SM-5LUB3 56.8
GTEX-SJXC-1226-SM-4DM78 56.6
GTEX-XOTO-0826-SM-4B65O 56.0
GTEX-WFON-1726-SM-4LVMQ 55.2
GTEX-YECK-1926-SM-4W21H 54.9
GTEX-ZYT6-0626-SM-5E45V 54.8
GTEX-PX3G-0826-SM-48TZS 53.8
GTEX-Z9EW-0426-SM-5CVM9 53.8
GTEX-11WQC-0726-SM-5EQMR 52.3
GTEX-RM2N-1926-SM-48FCU 52.3
GTEX-Y5V5-0926-SM-4VBPZ 52.2
GTEX-1212Z-0226-SM-59HLF 51.6
GTEX-13N11-0926-SM-5IJG2 51.1
GTEX-T6MN-1226-SM-3NMA5 50.7
GTEX-13PVR-0126-SM-5S2PY 50.6
GTEX-QV44-0326-SM-4R1KD 50.4
GTEX-13FTZ-0726-SM-5IFFY 50.2
GTEX-UPK5-1426-SM-4JBHH 49.8
GTEX-147JS-1126-SM-5RQIW 49.5
GTEX-11EQ9-0526-SM-5A5JZ 49.4
GTEX-1399R-1226-SM-5P9GF 49.3
GTEX-RU72-1426-SM-46MUF 49.3
GTEX-ZF29-2026-SM-4WWB7 49.0
GTEX-145LU-1326-SM-5LU9N 48.2
GTEX-ZF2S-3026-SM-4WWCH 47.9
GTEX-12WSM-0726-SM-5GCOW 46.7
GTEX-145MF-0826-SM-5QGQA 46.5
GTEX-WQUQ-1926-SM-4OOSA 46.2
GTEX-ZVP2-0626-SM-51MSO 45.8
GTEX-RWSA-1426-SM-47JXA 45.6
GTEX-1269C-0626-SM-5FQSS 45.5
GTEX-11OF3-0726-SM-5BC4Z 45.4
GTEX-13VXU-0926-SM-5IFFH 45.3
GTEX-UTHO-2426-SM-4JBHD 45.1
GTEX-1399T-0826-SM-5IFES 44.9
GTEX-QEG4-1826-SM-4R1JN 44.9
GTEX-WZTO-0626-SM-4PQYY 44.0
GTEX-13FLV-0326-SM-5N9DJ 43.9
GTEX-RN64-1826-SM-48FDV 43.6
GTEX-13NYB-1026-SM-5IFH3 43.5
GTEX-UPIC-0926-SM-4IHLV 43.4
GTEX-11ZUS-2526-SM-59872 43.3
GTEX-11ZTS-1426-SM-5EQMM 43.2
GTEX-14AS3-0126-SM-5Q5F4 43.0
GTEX-147F4-1426-SM-5LUA8 42.8
GTEX-X4EO-1126-SM-4QARQ 42.6
GTEX-WYVS-1926-SM-4PQZ2 41.9
GTEX-139YR-0226-SM-5IFEM 41.8
GTEX-YFC4-1526-SM-5IFJS 41.8
GTEX-R53T-0326-SM-48FEC 41.6
GTEX-131XH-0626-SM-5LZWH 41.1
GTEX-ZZPU-0426-SM-5GZYH 40.8
GTEX-X3Y1-2726-SM-4PQZH 39.7
GTEX-14E1K-0326-SM-5S2PE 39.2
GTEX-14753-1626-SM-5NQ9L 39.1
GTEX-QESD-2026-SM-447BI 38.9
GTEX-11ZVC-0726-SM-5FQT9 38.5
GTEX-OOBJ-0826-SM-3NB2K 38.5
GTEX-11DXY-0526-SM-5EGGQ 37.6
GTEX-11DXZ-0126-SM-5EGGY 37.4
GTEX-ZVT4-0626-SM-5E45T 37.4
GTEX-13112-1426-SM-5EGH8 37.0
GTEX-131YS-1626-SM-5HL6C 36.6
GTEX-RNOR-1426-SM-48FDJ 36.0
GTEX-U3ZN-0226-SM-3DB8D 35.0
GTEX-ZAB5-0426-SM-5CVMI 31.9
GTEX-13OW6-2626-SM-5IFF2 29.2
GTEX-11GSP-0626-SM-5986T 28.8
GTEX-12ZZZ-1326-SM-59HKW 18.6
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

865.0

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 865.0
FF:10018-101C9 64,69,70 years, mixed 865.0

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