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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:210.8TPM
GTEx:85.0RPKM
FANTOM5:279.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA019053

  

Antibody HPA019061

  

Adipocytes

 Medium   Low  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA019053

  

Antibody HPA019061

  

Adipocytes

 High   Not detected  

Fibroblasts

 Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

210.8
N/A Female, age 80
Sample 1
TPM: 142.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 187.9
N/A Female, age 57
Sample 3
TPM: 157.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 209.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 356.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

85.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 90.0
Samples: 350

Max RPKM: 170.7
Min RPKM: 48.9
Std RPKM: 20
Median RPKM: 87
GTEX-ZE7O-0226-SM-5S2N1 170.7
GTEX-OXRP-0226-SM-3NB14 157.9
GTEX-12584-0226-SM-5EQL5 151.8
GTEX-O5YT-0226-SM-32PK5 149.5
GTEX-14E6C-0226-SM-5S2N3 146.7
GTEX-11UD2-0126-SM-5EQL2 141.4
GTEX-TSE9-0226-SM-3DB84 139.2
GTEX-14C39-2526-SM-5S2UH 138.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 77.4
Samples: 227

Max RPKM: 156.6
Min RPKM: 31.1
Std RPKM: 20.2
Median RPKM: 73.7
GTEX-113JC-0726-SM-5GZZR 156.6
GTEX-11WQK-1526-SM-5EGKN 150.2
GTEX-WFJO-1026-SM-3GIKL 144.6
GTEX-14ICL-0926-SM-5S2TU 144.5
GTEX-13JUV-0626-SM-5J1MQ 133.7
GTEX-ZLV1-0926-SM-5S2MR 124.4
GTEX-13VXU-1026-SM-5KLZE 122.5
GTEX-14753-2526-SM-5LU97 121.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

279.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 279.3
FF:10010-101C1 65,65,76 years, mixed 279.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.