Tissue expression of PICALM - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	124.2	TPM
GTEx:	36.5	RPKM
FANTOM5:	138.2	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA019053	Antibody HPA019061
Squamous epithelial cells	Medium	Not detected

ESOPHAGUS - HPA RNA-seq

Average TPM	124.2

Female, age 70

Sample 1
TPM: 94.5

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 153.9

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 124.3

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	36.5

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 36.5

Samples: 286

Max RPKM: 60.5
Min RPKM: 23.8
Std RPKM: 6.5
Median RPKM: 36.2

GTEX-P4PP-0626-SM-3NM9X

60.5

GTEX-RU1J-0326-SM-46MUM

57.4

GTEX-XV7Q-1126-SM-4BRVS

56.1

GTEX-QV44-1126-SM-4R1KO

56.0

GTEX-14BMU-0926-SM-5S2QB

53.8

GTEX-ZA64-0626-SM-5HL9O

53.8

GTEX-R55G-1026-SM-48FDI

53.2

GTEX-139YR-1726-SM-5IFFK

52.4

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	138.2

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 138.2

FF:10015-101C6

68,74,75 years, mixed

138.2