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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:265.8TPM
GTEx:104.6RPKM
FANTOM5:1010.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA012569

 

Antibody HPA017053

 

Glandular cells

High   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

265.8

overview Male, age 65
Sample 1
TPM: 323.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 261.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 208.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 269.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

104.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 104.6
Samples: 88

Max RPKM: 370.4
Min RPKM: 0.2
Std RPKM: 93.7
Median RPKM: 86
GTEX-111YS-1426-SM-5GID8 370.4
GTEX-ZTSS-0926-SM-59865 339.8
GTEX-13D11-0726-SM-5LZZB 313.0
GTEX-ZPCL-1726-SM-57WEO 298.1
GTEX-Y9LG-1626-SM-5IFHM 294.3
GTEX-14DAR-1426-SM-5RQIR 273.3
GTEX-YF7O-1826-SM-5IFIU 265.5
GTEX-YEC4-1726-SM-4W21E 260.4
GTEX-1122O-1326-SM-5H11F 255.5
GTEX-ZTX8-0526-SM-59HLD 238.8
GTEX-13FTW-2026-SM-5IJE2 232.3
GTEX-13PL7-2626-SM-5IFH4 230.6
GTEX-ZVZP-1826-SM-5GZXB 216.4
GTEX-1399S-2026-SM-5KM4B 216.2
GTEX-XBED-1426-SM-4AT4G 216.0
GTEX-11DXX-1626-SM-5H11H 213.8
GTEX-145LT-1026-SM-5LU9O 183.3
GTEX-ZLV1-1126-SM-4WWBW 177.4
GTEX-11I78-1126-SM-5A5K5 176.6
GTEX-ZA64-1226-SM-5HL7B 173.2
GTEX-11EQ9-1326-SM-5985X 169.5
GTEX-ZXES-1526-SM-5NQ95 167.0
GTEX-YB5E-1526-SM-5IFIE 163.9
GTEX-ZZ64-0526-SM-5GZXM 160.2
GTEX-11P7K-1626-SM-5GU63 152.6
GTEX-13CF3-1226-SM-5LZXN 151.4
GTEX-XUZC-1426-SM-4BRV3 137.9
GTEX-X5EB-1626-SM-4E3IV 137.9
GTEX-ZVP2-1726-SM-5GU5P 130.7
GTEX-XXEK-1026-SM-4BRUW 127.1
GTEX-ZYFG-2026-SM-5E43Y 124.9
GTEX-ZVT2-2126-SM-5NQ93 118.5
GTEX-131XF-1326-SM-5GCMQ 118.4
GTEX-14E6E-1626-SM-5RQI7 117.0
GTEX-ZYWO-1526-SM-5SIAL 115.8
GTEX-WQUQ-2426-SM-4MVNW 111.6
GTEX-13FH7-1226-SM-5IJFK 108.0
GTEX-11P82-0826-SM-5P9GU 107.4
GTEX-ZPIC-2326-SM-57WDW 102.3
GTEX-139T6-1026-SM-5IJGC 100.8
GTEX-133LE-1426-SM-5IFH1 97.4
GTEX-11DXZ-1326-SM-5H11X 94.7
GTEX-ZLFU-1526-SM-4WWBT 92.2
GTEX-Y114-1426-SM-4TT6W 88.6
GTEX-XGQ4-1326-SM-4GIDU 83.3
GTEX-VJYA-0926-SM-4KL1N 83.2
GTEX-13113-1226-SM-5EGHT 77.2
GTEX-12BJ1-1926-SM-5HL9Z 70.3
GTEX-WFJO-0926-SM-4LVM2 69.3
GTEX-ZEX8-1826-SM-57WBH 66.5
GTEX-XAJ8-0526-SM-47JYK 66.2
GTEX-WFG7-1726-SM-4LVME 59.4
GTEX-1399R-2026-SM-5K7WN 54.3
GTEX-11XUK-1426-SM-5EQMG 53.5
GTEX-WH7G-1626-SM-4LVMY 53.1
GTEX-ZTPG-2626-SM-57WFX 52.6
GTEX-13RTK-0826-SM-5Q5C6 45.4
GTEX-13O61-1326-SM-5KM31 43.3
GTEX-13O21-1026-SM-5IJDU 42.6
GTEX-139YR-2226-SM-5IFFW 41.2
GTEX-Z9EW-0926-SM-5CVMM 38.1
GTEX-11NSD-1726-SM-5N9C3 36.1
GTEX-1399U-2126-SM-5IFEZ 35.7
GTEX-11VI4-1626-SM-5EQKO 23.5
GTEX-Y3IK-1726-SM-4YCCR 20.3
GTEX-ZQUD-0926-SM-57WE3 18.9
GTEX-WFG8-1626-SM-4LVMB 16.1
GTEX-WRHK-1026-SM-4MVOD 15.0
GTEX-111CU-1326-SM-5NQ8L 13.0
GTEX-13OVI-1926-SM-5IJCG 11.4
GTEX-131XG-1726-SM-5LZUR 10.7
GTEX-145ME-0926-SM-5O9AR 8.9
GTEX-X15G-1426-SM-4PQZK 7.9
GTEX-12WSK-1526-SM-5CVNO 7.2
GTEX-ZF2S-1726-SM-57WFT 6.4
GTEX-Y5LM-1626-SM-4VDTB 6.0
GTEX-ZP4G-1626-SM-57WGD 5.5
GTEX-ZQG8-2526-SM-57WEQ 4.2
GTEX-13QBU-1926-SM-5IJEW 4.2
GTEX-VUSG-1726-SM-4KKZL 3.9
GTEX-117YX-0326-SM-5GICL 2.6
GTEX-148VJ-2226-SM-5NQ9M 1.6
GTEX-WEY5-1526-SM-4LMJF 0.7
GTEX-13111-1426-SM-5DUW3 0.7
GTEX-XMK1-1826-SM-4B66F 0.6
GTEX-ZC5H-2326-SM-4WAYT 0.5
GTEX-UPK5-2026-SM-4JBIM 0.2
GTEX-1192X-2526-SM-59868 0.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1010.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1010.4
FF:10024-101D6 15,40,85 years, mixed 1010.4

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The Human Protein Atlas project is funded
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