Expression of FNDC3B in cancer - Summary

CANCER ATLAS

Gene description

Fibronectin type III domain containing 3B

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA007859

GENE INFORMATION
Gene name	FNDC3B (HGNC Symbol)
Synonyms	DKFZp762K137, FAD104, FLJ23399, PRO4979, YVTM2421
Description	Fibronectin type III domain containing 3B (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	q26.31
Chromosome location (bp)	172039628 - 172401665
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000075420 (version 83.38)
Entrez gene	64778
UniProt	Q53EP0 (UniProt - Evidence at protein level)
neXtProt	NX_Q53EP0
Antibodypedia	FNDC3B antibodies

PROTEIN BROWSER

FNDC3B-001	FNDC3B-002	FNDC3B-003	FNDC3B-004	FNDC3B-006	FNDC3B-008

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FNDC3B-001 ENSP00000338523 ENST00000336824	Q53EP0 [Direct mapping] Fibronectin type III domain-containing protein 3B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] GO:0044822 [poly(A) RNA binding] Show all	1204 aa 132.9 kDa	No	1
FNDC3B-002 ENSP00000408496 ENST00000421757	Q53EP0 [Direct mapping] Fibronectin type III domain-containing protein 3B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] GO:0044822 [poly(A) RNA binding] Show all	71 aa 7.8 kDa	No	0
FNDC3B-003 ENSP00000389094 ENST00000416957	Q53EP0 [Direct mapping] Fibronectin type III domain-containing protein 3B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] GO:0044822 [poly(A) RNA binding] Show all	1204 aa 132.9 kDa	No	1
FNDC3B-004 ENSP00000411242 ENST00000415807	Q53EP0 [Direct mapping] Fibronectin type III domain-containing protein 3B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] GO:0044822 [poly(A) RNA binding] Show all	1204 aa 132.9 kDa	No	1
FNDC3B-006 ENSP00000389064 ENST00000443501	C9JKH7 [Direct mapping] Fibronectin type III domain-containing protein 3B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		208 aa 23.2 kDa	No	0
FNDC3B-008 ENSP00000392471 ENST00000423424	Q53EP0 [Direct mapping] Fibronectin type III domain-containing protein 3B Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] GO:0044822 [poly(A) RNA binding] Show all	71 aa 7.8 kDa	No	0