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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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MKRN2
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA037559

 

Antibody HPA037560

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA037559   HPA037560  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

7   7  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA037559

 

Antibody HPA037560

 
Immunocytochemistry

Approved   Approved  
Immunohistochemistry

Approved   Approved  
Western blot

Supported   Supported  
Protein array

Approved   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA037559

 

Antibody HPA037560

 

Standard validation

Approved   Approved  

   

Figure description

Immunofluorescent staining of human cell line U-251 MG shows localization to cytosol.   Immunofluorescent staining of human cell line A-431 shows localization to nucleoplasm & cytosol.  

Antibody dilution

1:68   1:139  

Literature conformity

The subcellular location is partly supported by literature or no literature is available.   The subcellular location is partly supported by literature or no literature is available.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA037559

 

Antibody HPA037560

 

Standard validation

Approved   Approved  

   

Figure description

Immunohistochemical staining of human rectum shows strong cytoplasmic and nuclear positivity in glandular cells.   Immunohistochemical staining of human kidney shows strong cytoplasmic positivity in cells of tubules.  

Expression

RNA: detected in 37 tissues
Protein: detected in 73 cell types
  RNA: detected in 37 tissues
Protein: detected in 67 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:50   1:350  

Literature conformity

Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

Mainly not consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA037559

 

Antibody HPA037560

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

46.9, 46.7, 42   46.9, 46.7, 42  

Antibody dilution

1:250   1:250  

PROTEIN ARRAY

 
 

Antibody HPA037559

 

Antibody HPA037560

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:3000  

ANTIGEN INFORMATION

 
 

Antibody HPA037559

 

Antibody HPA037560

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

75   89  

Antigen sequence

NSHEPGKREKRTLVLRDRNLSGMAERKTQPSMVSNPGSCSDPQPSPEMKP
HSYLDAIRSGLDDVEASSSYSNEQQ
 
ACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSQGTVRFFNS
VRLWDFIENRESRHVPNNEDVDMTELGDLFMHLSGVESS
 

Matching transcripts

MKRN2-001 - ENSP00000170447 [100%]
MKRN2-002 - ENSP00000396340 [100%]
MKRN2-003 - ENSP00000397983 [100%]
  MKRN2-001 - ENSP00000170447 [100%]
MKRN2-002 - ENSP00000396340 [100%]
MKRN2-003 - ENSP00000397983 [100%]
 

Other gene match

   
ANTIGEN VIEW
MKRN2-001
MKRN2-002
MKRN2-003
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.