Tissue expression of MCAM - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	100.8	TPM
GTEx:	14.2	RPKM
FANTOM5:	87.7	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Not detected

Antibody staining	Antibody HPA008848	Antibody CAB002147
Squamous epithelial cells	Not detected	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	100.8

Female, age 70

Sample 1
TPM: 61.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 149.9

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 90.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	14.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 14.2

Samples: 286

Max RPKM: 57.6
Min RPKM: 2.2
Std RPKM: 8.2
Median RPKM: 11.9

GTEX-WEY5-0926-SM-4LMI4

57.6

GTEX-11VI4-0526-SM-5EQ48

50.8

GTEX-13X6I-1026-SM-5LU4C

50.8

GTEX-13FLV-1126-SM-5J2NO

38.3

GTEX-ZYW4-1326-SM-5E45N

36.8

GTEX-ZAB5-0926-SM-5CVMV

36.4

GTEX-PVOW-1626-SM-48TC9

36.2

GTEX-XOTO-2126-SM-4B64U

36.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	87.7

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 87.7

FF:10015-101C6

68,74,75 years, mixed

87.7