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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:100.4RPKM
FANTOM5:599.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA001922

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

100.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 100.4
Samples: 117

Max RPKM: 230.9
Min RPKM: 12.8
Std RPKM: 52.7
Median RPKM: 108.2
GTEX-T6MN-0011-R5A-SM-32QPD 230.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 229.8
GTEX-13G51-0011-R5a-SM-5L3EB 216.2
GTEX-131YS-0011-R5b-SM-5K7YB 207.8
GTEX-12WSC-0011-R5b-SM-5CVNS 181.3
GTEX-14BIM-0011-R5b-SM-5S2RM 176.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 172.9
GTEX-145MH-0011-R5a-SM-5P9JT 170.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 167.7
GTEX-UTHO-0011-R5A-SM-3GIJD 167.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 166.3
GTEX-RU72-0011-R5A-SM-2TF6U 164.9
GTEX-1399T-0011-R5b-SM-5IJDK 164.8
GTEX-11GSP-0011-R5a-SM-57WBE 162.4
GTEX-13SLX-0011-R5a-SM-5O9BV 160.1
GTEX-13O3O-0011-R5b-SM-5KM44 159.5
GTEX-12WSF-0011-R5a-SM-5HL8K 158.6
GTEX-13FXS-0011-R5b-SM-5LZYE 151.7
GTEX-WL46-0011-R5A-SM-3LK6V 151.0
GTEX-ZUA1-0011-R5b-SM-51MTG 150.8
GTEX-1313W-0011-R5b-SM-5L3EP 149.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 148.7
GTEX-T5JC-0011-R5A-SM-32PLK 147.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 145.6
GTEX-P44H-0011-R5A-SM-2XCEX 144.2
GTEX-QVJO-0011-R5A-SM-2S1QM 143.3
GTEX-WVLH-0011-R5A-SM-3MJFW 143.3
GTEX-13VXU-0011-R5a-SM-5O9D7 141.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 139.6
GTEX-13OVL-0011-R5b-SM-5L3FU 139.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 138.3
GTEX-N7MS-0011-R5a-SM-2HMK8 134.5
GTEX-WZTO-0011-R5B-SM-3NMC5 134.4
GTEX-145LS-0011-R5a-SM-5SI65 134.0
GTEX-13FLW-0011-R5a-SM-5LZX6 133.7
GTEX-X585-0011-R5A-SM-46MVI 132.9
GTEX-13X6K-0011-R5b-SM-5PNUE 132.7
GTEX-N7MT-0011-R5a-SM-2I3G6 129.5
GTEX-13S7M-0011-R5b-SM-5P9HS 129.4
GTEX-13X6J-0011-R5b-SM-5PNWT 129.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 127.7
GTEX-TSE9-0011-R5A-SM-3DB7J 126.8
GTEX-WWYW-0011-R5A-SM-3NB3E 126.0
GTEX-RVPU-0011-R5A-SM-2XCAD 125.8
GTEX-14ABY-0011-R5b-SM-5SI7B 122.1
GTEX-11NV4-0011-R5a-SM-5NQ88 121.4
GTEX-13CZV-0011-R5a-SM-5K7XA 120.8
GTEX-Z93S-0011-R5b-SM-4RGNI 120.8
GTEX-PVOW-0011-R5A-SM-32PL7 117.8
GTEX-13OVH-0011-R5b-SM-5KM4L 117.7
GTEX-13OW6-0011-R5a-SM-5O9BK 115.3
GTEX-S7SE-0011-R5A-SM-2XCDA 115.2
GTEX-11OF3-0011-R5a-SM-57WB4 114.6
GTEX-RVPV-0011-R5A-SM-2TF69 113.2
GTEX-13OW7-0011-R5b-SM-5O9DM 113.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 111.4
GTEX-T2IS-0011-R5A-SM-32QP4 111.0
GTEX-132Q8-0011-R5a-SM-5IJDM 108.6
GTEX-R55E-0011-R5A-SM-2TC5N 108.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 106.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 106.3
GTEX-ZE7O-0011-R5a-SM-57WBO 106.3
GTEX-12WSD-0011-R5b-SM-5CVNG 104.4
GTEX-11H98-0011-R5b-SM-57WCF 102.6
GTEX-13JUV-0011-R5a-SM-5LZY5 102.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 101.9
GTEX-OHPN-0011-R5A-SM-2I5FF 98.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 96.1
GTEX-13OW5-0011-R5b-SM-5L3FR 95.5
GTEX-13NYB-0011-R5a-SM-5MR45 93.6
GTEX-XOTO-0011-R5A-SM-4B657 88.8
GTEX-13X6I-0011-R5a-SM-5PNWW 85.8
GTEX-14BIN-0011-R5b-SM-5SI78 84.0
GTEX-YFC4-0011-R5a-SM-4RGLR 73.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 73.0
GTEX-ZXG5-0011-R5b-SM-57WBN 71.8
GTEX-NL4W-0011-R5a-SM-2I3GD 71.2
GTEX-13FLV-0011-R5a-SM-5LZWT 69.5
GTEX-XMD1-0011-R5A-SM-4AT47 67.6
GTEX-12ZZX-0011-R5a-SM-5HL89 66.8
GTEX-13NYS-0011-R5a-SM-5MR4D 66.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 63.2
GTEX-13JVG-0011-R5a-SM-5MR4O 62.2
GTEX-OXRN-0011-R5A-SM-2I5EF 61.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 58.6
GTEX-YJ89-0011-R5a-SM-4V6GM 53.8
GTEX-144GL-0011-R5b-SM-5PNUJ 53.4
GTEX-QMR6-0011-R5A-SM-32PKT 50.3
GTEX-139TT-0011-R5b-SM-5K7W8 49.7
GTEX-12WSB-0011-R5b-SM-5GU67 49.4
GTEX-11WQC-0011-R5a-SM-5BC74 45.1
GTEX-13112-0011-R5b-SM-5DUV8 44.0
GTEX-13CIG-0011-R5b-SM-5L3F2 43.2
GTEX-X4XX-0011-R5A-SM-46MWN 41.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 40.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 36.6
GTEX-144GO-0011-R5a-SM-5PNUR 35.9
GTEX-X261-0011-R5A-SM-3NMB4 35.8
GTEX-13FHP-0011-R5b-SM-5LZY2 35.6
GTEX-ZV68-0011-R5a-SM-4YCDW 34.8
GTEX-ZVT3-0011-R5a-SM-51MSI 34.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 32.6
GTEX-1477Z-0011-R5b-SM-5PNUO 31.2
GTEX-NL3H-0011-R5a-SM-2I3GB 30.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 28.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 26.3
GTEX-139TS-0011-R5b-SM-5J2MZ 26.1
GTEX-1445S-0011-R5a-SM-5PNUS 24.7
GTEX-S7PM-0011-R5A-SM-3NM8G 23.1
GTEX-12WSA-0011-R5b-SM-5GU5I 22.5
GTEX-12WSH-0011-R5b-SM-5P9F3 22.3
GTEX-NPJ7-0011-R5a-SM-33HBK 22.1
GTEX-13CF2-0011-R5a-SM-5LZWS 19.5
GTEX-139T8-0011-R5b-SM-5J1MO 19.0
GTEX-11UD1-0011-R5b-SM-5P9FP 17.5
GTEX-145MG-0011-R5b-SM-5S2VU 14.5
GTEX-13NZA-0011-R5b-SM-5KM4K 12.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

599.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 599.5
FF:10164-103B2 76 years, female 752.8
FF:10379-105H1 89 years, female 446.2

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