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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.9TPM
GTEx:12.7RPKM
FANTOM5:34.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA001922

 

Glandular cells

High  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

24.9

overview Male, age 65
Sample 1
TPM: 13.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 35.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 26.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 23.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

12.7

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 12.7
Samples: 88

Max RPKM: 38.5
Min RPKM: 0.6
Std RPKM: 8.4
Median RPKM: 12
GTEX-YB5E-1526-SM-5IFIE 38.5
GTEX-1122O-1326-SM-5H11F 35.2
GTEX-ZTSS-0926-SM-59865 32.6
GTEX-14DAR-1426-SM-5RQIR 31.6
GTEX-XUZC-1426-SM-4BRV3 27.4
GTEX-ZVZP-1826-SM-5GZXB 25.1
GTEX-YF7O-1826-SM-5IFIU 24.1
GTEX-ZYFG-2026-SM-5E43Y 24.0
GTEX-133LE-1426-SM-5IFH1 22.6
GTEX-ZLV1-1126-SM-4WWBW 22.5
GTEX-11I78-1126-SM-5A5K5 22.3
GTEX-ZPCL-1726-SM-57WEO 21.1
GTEX-XGQ4-1326-SM-4GIDU 20.5
GTEX-131XF-1326-SM-5GCMQ 20.3
GTEX-13PL7-2626-SM-5IFH4 19.7
GTEX-145LT-1026-SM-5LU9O 19.6
GTEX-ZXES-1526-SM-5NQ95 19.2
GTEX-13D11-0726-SM-5LZZB 18.9
GTEX-XBED-1426-SM-4AT4G 18.8
GTEX-139T6-1026-SM-5IJGC 18.8
GTEX-ZA64-1226-SM-5HL7B 18.6
GTEX-11P7K-1626-SM-5GU63 18.4
GTEX-Y9LG-1626-SM-5IFHM 18.4
GTEX-139YR-2226-SM-5IFFW 18.0
GTEX-1399R-2026-SM-5K7WN 17.7
GTEX-YEC4-1726-SM-4W21E 17.7
GTEX-111YS-1426-SM-5GID8 17.4
GTEX-13113-1226-SM-5EGHT 17.4
GTEX-ZLFU-1526-SM-4WWBT 17.3
GTEX-ZTX8-0526-SM-59HLD 17.1
GTEX-11DXZ-1326-SM-5H11X 16.4
GTEX-WQUQ-2426-SM-4MVNW 16.3
GTEX-ZYWO-1526-SM-5SIAL 15.8
GTEX-XXEK-1026-SM-4BRUW 15.3
GTEX-11EQ9-1326-SM-5985X 15.3
GTEX-1399S-2026-SM-5KM4B 15.3
GTEX-11DXX-1626-SM-5H11H 14.8
GTEX-X5EB-1626-SM-4E3IV 14.5
GTEX-ZTPG-2626-SM-57WFX 14.0
GTEX-ZZ64-0526-SM-5GZXM 13.8
GTEX-13FTW-2026-SM-5IJE2 13.5
GTEX-Y114-1426-SM-4TT6W 13.4
GTEX-12BJ1-1926-SM-5HL9Z 12.9
GTEX-WFG7-1726-SM-4LVME 12.0
GTEX-ZEX8-1826-SM-57WBH 12.0
GTEX-14E6E-1626-SM-5RQI7 11.8
GTEX-11XUK-1426-SM-5EQMG 10.6
GTEX-ZVT2-2126-SM-5NQ93 10.0
GTEX-Y5LM-1626-SM-4VDTB 10.0
GTEX-13CF3-1226-SM-5LZXN 9.1
GTEX-XAJ8-0526-SM-47JYK 9.1
GTEX-Y3IK-1726-SM-4YCCR 8.9
GTEX-13FH7-1226-SM-5IJFK 8.8
GTEX-13RTK-0826-SM-5Q5C6 8.2
GTEX-11P82-0826-SM-5P9GU 8.2
GTEX-1399U-2126-SM-5IFEZ 8.2
GTEX-ZP4G-1626-SM-57WGD 8.1
GTEX-WH7G-1626-SM-4LVMY 7.9
GTEX-13O21-1026-SM-5IJDU 7.1
GTEX-WFJO-0926-SM-4LVM2 6.9
GTEX-13QBU-1926-SM-5IJEW 6.8
GTEX-VJYA-0926-SM-4KL1N 6.8
GTEX-WRHK-1026-SM-4MVOD 6.7
GTEX-11NSD-1726-SM-5N9C3 6.6
GTEX-ZVP2-1726-SM-5GU5P 6.6
GTEX-13O61-1326-SM-5KM31 6.5
GTEX-11VI4-1626-SM-5EQKO 6.3
GTEX-ZPIC-2326-SM-57WDW 5.9
GTEX-Z9EW-0926-SM-5CVMM 5.7
GTEX-WFG8-1626-SM-4LVMB 5.1
GTEX-ZQG8-2526-SM-57WEQ 4.7
GTEX-145ME-0926-SM-5O9AR 4.1
GTEX-148VJ-2226-SM-5NQ9M 3.9
GTEX-VUSG-1726-SM-4KKZL 3.8
GTEX-131XG-1726-SM-5LZUR 3.7
GTEX-13OVI-1926-SM-5IJCG 3.7
GTEX-X15G-1426-SM-4PQZK 3.6
GTEX-12WSK-1526-SM-5CVNO 2.0
GTEX-ZQUD-0926-SM-57WE3 1.7
GTEX-ZC5H-2326-SM-4WAYT 1.5
GTEX-UPK5-2026-SM-4JBIM 1.4
GTEX-13111-1426-SM-5DUW3 1.4
GTEX-WEY5-1526-SM-4LMJF 1.2
GTEX-ZF2S-1726-SM-57WFT 1.1
GTEX-XMK1-1826-SM-4B66F 1.0
GTEX-1192X-2526-SM-59868 1.0
GTEX-117YX-0326-SM-5GICL 1.0
GTEX-111CU-1326-SM-5NQ8L 0.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

34.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 34.0
FF:10024-101D6 15,40,85 years, mixed 34.0

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